Protein–RNA interactions for Protein: P33203

PRP40, Pre-mRNA-processing protein PRP40, yeastyeast

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP40P33203 YLL006W-AYLL006W-A 177 nt1.28□□□□□ -2.2
PRP40P33203 YLL066W-BYLL066W-B 171 nt1.25□□□□□ -2.21
PRP40P33203 NST1YNL091W 3723 nt1.24□□□□□ -2.21
PRP40P33203 YMR160WYMR160W 2451 nt1.23□□□□□ -2.21
PRP40P33203 YBL071C-BYBL071C-B 99 nt1.23□□□□□ -2.21
PRP40P33203 YPL060C-AYPL060C-A 3315 nt1.22□□□□□ -2.21
PRP40P33203 CSE1YGL238W 2883 nt1.21□□□□□ -2.22
PRP40P33203 snR62snR62 100 nt1.21□□□□□ -2.22
PRP40P33203 snR45snR45 172 nt1.21□□□□□ -2.22
PRP40P33203 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
PRP40P33203 tD(GUC)QtD(GUC)Q 75 nt1.2□□□□□ -2.22
PRP40P33203 RPS26AYGL189C 360 nt1.2□□□□□ -2.22
PRP40P33203 YKL145W-AYKL145W-A 93 nt1.19□□□□□ -2.22
PRP40P33203 YLR286W-AYLR286W-A 135 nt1.19□□□□□ -2.22
PRP40P33203 EST1YLR233C 2100 nt1.19□□□□□ -2.22
PRP40P33203 snR69snR69 101 nt1.17□□□□□ -2.22
PRP40P33203 YBL100W-CYBL100W-C 120 nt1.17□□□□□ -2.22
PRP40P33203 BEM2YER155C 6504 nt1.16□□□□□ -2.22
PRP40P33203 RKR1YMR247C 4689 nt1.16□□□□□ -2.22
PRP40P33203 NIP1YMR309C 2439 nt1.15□□□□□ -2.23
PRP40P33203 YPR117WYPR117W 7470 nt1.14□□□□□ -2.23
PRP40P33203 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
PRP40P33203 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
PRP40P33203 BUL2YML111W 2763 nt1.13□□□□□ -2.23
PRP40P33203 YJL077W-AYJL077W-A 87 nt1.13□□□□□ -2.23
PRP40P33203 YOL164W-AYOL164W-A 183 nt1.13□□□□□ -2.23
PRP40P33203 LTE1YAL024C 4308 nt1.13□□□□□ -2.23
PRP40P33203 RDS3YPR094W 324 nt1.11□□□□□ -2.23
PRP40P33203 YLR299C-AYLR299C-A 93 nt1.08□□□□□ -2.24
PRP40P33203 YDL159C-BYDL159C-B 177 nt1.07□□□□□ -2.24
PRP40P33203 YGR240C-AYGR240C-A 201 nt1.06□□□□□ -2.24
PRP40P33203 YOR192C-BYOR192C-B 5313 nt1.06□□□□□ -2.24
PRP40P33203 VAM6YDL077C 3150 nt1.05□□□□□ -2.24
PRP40P33203 YDR034C-AYDR034C-A 177 nt1.04□□□□□ -2.24
PRP40P33203 PET111YMR257C 2403 nt1.03□□□□□ -2.25
PRP40P33203 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
PRP40P33203 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
PRP40P33203 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
PRP40P33203 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
PRP40P33203 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
PRP40P33203 YDR371C-AYDR371C-A 105 nt1□□□□□ -2.25
PRP40P33203 MYO1YHR023W 5787 nt0.98□□□□□ -2.25
PRP40P33203 tQ(UUG)QtQ(UUG)Q 76 nt0.97□□□□□ -2.25
PRP40P33203 snR47snR47 99 nt0.97□□□□□ -2.25
PRP40P33203 tT(AGU)BtT(AGU)B 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)CtT(AGU)C 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)DtT(AGU)D 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)HtT(AGU)H 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)I1tT(AGU)I1 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)I2tT(AGU)I2 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)JtT(AGU)J 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)N1tT(AGU)N1 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)N2tT(AGU)N2 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)O1tT(AGU)O1 73 nt0.94□□□□□ -2.26
PRP40P33203 tT(AGU)O2tT(AGU)O2 73 nt0.94□□□□□ -2.26
PRP40P33203 MLP1YKR095W 5628 nt0.93□□□□□ -2.26
PRP40P33203 AI1Q0050 2505 nt0.9□□□□□ -2.27
PRP40P33203 ORC3YLL004W 1851 nt0.9□□□□□ -2.27
PRP40P33203 YHR180C-BYHR180C-B 105 nt0.86□□□□□ -2.27
PRP40P33203 YER090C-AYER090C-A 90 nt0.84□□□□□ -2.27
PRP40P33203 YML054C-AYML054C-A 159 nt0.84□□□□□ -2.27
PRP40P33203 YBL100W-BYBL100W-B 5313 nt0.83□□□□□ -2.28
PRP40P33203 IQG1YPL242C 4488 nt0.81□□□□□ -2.28
PRP40P33203 FMP27YLR454W 7887 nt0.81□□□□□ -2.28
PRP40P33203 THO2YNL139C 4794 nt0.81□□□□□ -2.28
PRP40P33203 YNL054W-BYNL054W-B 5250 nt0.78□□□□□ -2.28
PRP40P33203 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
PRP40P33203 snR50snR50 90 nt0.77□□□□□ -2.29
PRP40P33203 RPL41AYDL184C 78 nt0.75□□□□□ -2.29
PRP40P33203 YBR109W-AYBR109W-A 225 nt0.74□□□□□ -2.29
PRP40P33203 YBR296C-AYBR296C-A 120 nt0.72□□□□□ -2.29
PRP40P33203 YER078W-AYER078W-A 165 nt0.71□□□□□ -2.3
PRP40P33203 YOR186C-AYOR186C-A 210 nt0.71□□□□□ -2.3
PRP40P33203 snR64snR64 101 nt0.69□□□□□ -2.3
PRP40P33203 YKL225WYKL225W 348 nt0.69□□□□□ -2.3
PRP40P33203 MLP2YIL149C 5040 nt0.65□□□□□ -2.3
PRP40P33203 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
PRP40P33203 snR67snR67 82 nt0.64□□□□□ -2.31
PRP40P33203 UTP10YJL109C 5310 nt0.63□□□□□ -2.31
PRP40P33203 snR53snR53 91 nt0.63□□□□□ -2.31
PRP40P33203 snR38snR38 95 nt0.6□□□□□ -2.31
PRP40P33203 SOV1YMR066W 2697 nt0.45□□□□□ -2.34
PRP40P33203 YML100W-AYML100W-A 174 nt0.43□□□□□ -2.34
PRP40P33203 SKI7YOR076C 2244 nt0.42□□□□□ -2.34
PRP40P33203 ESP1YGR098C 4893 nt0.41□□□□□ -2.34
PRP40P33203 YOL013W-AYOL013W-A 192 nt0.37□□□□□ -2.35
PRP40P33203 snR128snR128 126 nt0.34□□□□□ -2.36
PRP40P33203 YDL159W-AYDL159W-A 132 nt0.32□□□□□ -2.36
PRP40P33203 YGR122C-AYGR122C-A 129 nt0.26□□□□□ -2.37
PRP40P33203 YKL106C-AYKL106C-A 120 nt0.25□□□□□ -2.37
PRP40P33203 YLR149C-AYLR149C-A 87 nt0.15□□□□□ -2.39
PRP40P33203 PAU9YBL108C-A 129 nt0.15□□□□□ -2.39
PRP40P33203 YOR376W-AYOR376W-A 156 nt0.04□□□□□ -2.4
PRP40P33203 tA(UGC)QtA(UGC)Q 76 nt-0.01□□□□□ -2.41
PRP40P33203 YDL114W-AYDL114W-A 114 nt-0.02□□□□□ -2.41
PRP40P33203 YKL096C-BYKL096C-B 150 nt-0.02□□□□□ -2.41
PRP40P33203 YOR316C-AYOR316C-A 210 nt-0.03□□□□□ -2.41
PRP40P33203 SBH2YER019C-A 267 nt-0.1□□□□□ -2.43
PRP40P33203 tV(UAC)QtV(UAC)Q 76 nt-0.11□□□□□ -2.43
PRP40P33203 snR77snR77 88 nt-0.2□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms