Protein–RNA interactions for Protein: P25365

SED4, Putative guanine nucleotide-exchange factor SED4, yeastyeast

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SED4P25365 HUG1YML058W-A 207 nt1.03□□□□□ -2.24
SED4P25365 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
SED4P25365 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
SED4P25365 tV(UAC)BtV(UAC)B 74 nt1.02□□□□□ -2.25
SED4P25365 tV(UAC)DtV(UAC)D 74 nt1.02□□□□□ -2.25
SED4P25365 NIP1YMR309C 2439 nt1.02□□□□□ -2.25
SED4P25365 DOP1YDR141C 5097 nt1.02□□□□□ -2.25
SED4P25365 YBL100W-CYBL100W-C 120 nt1.01□□□□□ -2.25
SED4P25365 IML1YJR138W 4755 nt1□□□□□ -2.25
SED4P25365 YDR034C-AYDR034C-A 177 nt1□□□□□ -2.25
SED4P25365 YGR240C-AYGR240C-A 201 nt1□□□□□ -2.25
SED4P25365 SCC2YDR180W 4482 nt1□□□□□ -2.25
SED4P25365 SIP4YJL089W 2490 nt0.98□□□□□ -2.25
SED4P25365 BEM2YER155C 6504 nt0.98□□□□□ -2.25
SED4P25365 RDS3YPR094W 324 nt0.97□□□□□ -2.25
SED4P25365 YDL159C-BYDL159C-B 177 nt0.96□□□□□ -2.26
SED4P25365 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
SED4P25365 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
SED4P25365 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
SED4P25365 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
SED4P25365 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
SED4P25365 YLR299C-AYLR299C-A 93 nt0.96□□□□□ -2.26
SED4P25365 YOR192C-BYOR192C-B 5313 nt0.96□□□□□ -2.26
SED4P25365 YJL077W-AYJL077W-A 87 nt0.95□□□□□ -2.26
SED4P25365 ORC3YLL004W 1851 nt0.93□□□□□ -2.26
SED4P25365 snR47snR47 99 nt0.93□□□□□ -2.26
SED4P25365 PAU12YGR294W 363 nt0.92□□□□□ -2.26
SED4P25365 YNL054W-BYNL054W-B 5250 nt0.9□□□□□ -2.27
SED4P25365 MYO1YHR023W 5787 nt0.9□□□□□ -2.27
SED4P25365 YDR371C-AYDR371C-A 105 nt0.88□□□□□ -2.27
SED4P25365 LTE1YAL024C 4308 nt0.86□□□□□ -2.27
SED4P25365 PET111YMR257C 2403 nt0.85□□□□□ -2.27
SED4P25365 PAU24YBR301W 363 nt0.84□□□□□ -2.27
SED4P25365 tQ(UUG)QtQ(UUG)Q 76 nt0.83□□□□□ -2.28
SED4P25365 YML054C-AYML054C-A 159 nt0.81□□□□□ -2.28
SED4P25365 YBL100W-BYBL100W-B 5313 nt0.77□□□□□ -2.29
SED4P25365 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
SED4P25365 YER090C-AYER090C-A 90 nt0.76□□□□□ -2.29
SED4P25365 YHR180C-BYHR180C-B 105 nt0.76□□□□□ -2.29
SED4P25365 YBR109W-AYBR109W-A 225 nt0.75□□□□□ -2.29
SED4P25365 snR50snR50 90 nt0.74□□□□□ -2.29
SED4P25365 snR64snR64 101 nt0.72□□□□□ -2.29
SED4P25365 YKL225WYKL225W 348 nt0.7□□□□□ -2.3
SED4P25365 snR53snR53 91 nt0.69□□□□□ -2.3
SED4P25365 MLP1YKR095W 5628 nt0.69□□□□□ -2.3
SED4P25365 RPL41AYDL184C 78 nt0.68□□□□□ -2.3
SED4P25365 snR38snR38 95 nt0.68□□□□□ -2.3
SED4P25365 YBR296C-AYBR296C-A 120 nt0.68□□□□□ -2.3
SED4P25365 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
SED4P25365 tF(GAA)BtF(GAA)B 73 nt0.63□□□□□ -2.31
SED4P25365 tF(GAA)FtF(GAA)F 73 nt0.63□□□□□ -2.31
SED4P25365 tF(GAA)GtF(GAA)G 73 nt0.63□□□□□ -2.31
SED4P25365 tF(GAA)H1tF(GAA)H1 73 nt0.63□□□□□ -2.31
SED4P25365 tF(GAA)H2tF(GAA)H2 73 nt0.63□□□□□ -2.31
SED4P25365 tF(GAA)MtF(GAA)M 73 nt0.63□□□□□ -2.31
SED4P25365 tF(GAA)P1tF(GAA)P1 73 nt0.63□□□□□ -2.31
SED4P25365 tF(GAA)P2tF(GAA)P2 73 nt0.63□□□□□ -2.31
SED4P25365 IQG1YPL242C 4488 nt0.63□□□□□ -2.31
SED4P25365 YMR160WYMR160W 2451 nt0.63□□□□□ -2.31
SED4P25365 AI1Q0050 2505 nt0.61□□□□□ -2.31
SED4P25365 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
SED4P25365 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
SED4P25365 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
SED4P25365 snR67snR67 82 nt0.57□□□□□ -2.32
SED4P25365 YOR186C-AYOR186C-A 210 nt0.56□□□□□ -2.32
SED4P25365 UTP20YBL004W 7482 nt0.56□□□□□ -2.32
SED4P25365 YKL145W-AYKL145W-A 93 nt0.53□□□□□ -2.32
SED4P25365 YOL014WYOL014W 375 nt0.51□□□□□ -2.33
SED4P25365 SOV1YMR066W 2697 nt0.47□□□□□ -2.33
SED4P25365 ESP1YGR098C 4893 nt0.46□□□□□ -2.34
SED4P25365 FMP27YLR454W 7887 nt0.44□□□□□ -2.34
SED4P25365 YDL159W-AYDL159W-A 132 nt0.44□□□□□ -2.34
SED4P25365 YML100W-AYML100W-A 174 nt0.43□□□□□ -2.34
SED4P25365 SKI7YOR076C 2244 nt0.43□□□□□ -2.34
SED4P25365 MLP2YIL149C 5040 nt0.42□□□□□ -2.34
SED4P25365 YGR122C-AYGR122C-A 129 nt0.33□□□□□ -2.36
SED4P25365 YOL013W-AYOL013W-A 192 nt0.32□□□□□ -2.36
SED4P25365 YLR149C-AYLR149C-A 87 nt0.3□□□□□ -2.36
SED4P25365 THO2YNL139C 4794 nt0.29□□□□□ -2.36
SED4P25365 snR128snR128 126 nt0.26□□□□□ -2.37
SED4P25365 YKL106C-AYKL106C-A 120 nt0.25□□□□□ -2.37
SED4P25365 YER078W-AYER078W-A 165 nt0.21□□□□□ -2.38
SED4P25365 YOR376W-AYOR376W-A 156 nt0.14□□□□□ -2.39
SED4P25365 YKL096C-BYKL096C-B 150 nt0.12□□□□□ -2.39
SED4P25365 PAU9YBL108C-A 129 nt0.11□□□□□ -2.39
SED4P25365 YDL114W-AYDL114W-A 114 nt0.07□□□□□ -2.4
SED4P25365 tV(UAC)QtV(UAC)Q 76 nt0.04□□□□□ -2.4
SED4P25365 YOR316C-AYOR316C-A 210 nt0.04□□□□□ -2.4
SED4P25365 tA(UGC)QtA(UGC)Q 76 nt0.02□□□□□ -2.41
SED4P25365 SBH2YER019C-A 267 nt-0.05□□□□□ -2.42
SED4P25365 snR77snR77 88 nt-0.09□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms