Protein–RNA interactions for Protein: P25354

YCR007C, DUP240 protein YCR007C, yeastyeast

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCR007CP25354 YIL142C-AYIL142C-A 333 nt0.32□□□□□ -2.36
YCR007CP25354 YMR160WYMR160W 2451 nt0.31□□□□□ -2.36
YCR007CP25354 SOM1YEL059C-A 225 nt0.3□□□□□ -2.36
YCR007CP25354 YNL205CYNL205C 423 nt0.3□□□□□ -2.36
YCR007CP25354 RPM2YML091C 3609 nt0.3□□□□□ -2.36
YCR007CP25354 YOR186C-AYOR186C-A 210 nt0.29□□□□□ -2.36
YCR007CP25354 EST1YLR233C 2100 nt0.28□□□□□ -2.36
YCR007CP25354 YCL001W-BYCL001W-B 255 nt0.28□□□□□ -2.36
YCR007CP25354 PMP2YEL017C-A 132 nt0.27□□□□□ -2.37
YCR007CP25354 YNL054W-BYNL054W-B 5250 nt0.25□□□□□ -2.37
YCR007CP25354 YCR095W-AYCR095W-A 159 nt0.25□□□□□ -2.37
YCR007CP25354 snR69snR69 101 nt0.25□□□□□ -2.37
YCR007CP25354 YIL071W-AYIL071W-A 477 nt0.25□□□□□ -2.37
YCR007CP25354 tQ(UUG)QtQ(UUG)Q 76 nt0.21□□□□□ -2.38
YCR007CP25354 YJL077W-AYJL077W-A 87 nt0.21□□□□□ -2.38
YCR007CP25354 YNL170WYNL170W 396 nt0.21□□□□□ -2.38
YCR007CP25354 YOL013W-AYOL013W-A 192 nt0.21□□□□□ -2.38
YCR007CP25354 YPL060C-AYPL060C-A 3315 nt0.21□□□□□ -2.38
YCR007CP25354 SEC10YLR166C 2616 nt0.2□□□□□ -2.38
YCR007CP25354 FMP27YLR454W 7887 nt0.2□□□□□ -2.38
YCR007CP25354 UTP20YBL004W 7482 nt0.19□□□□□ -2.38
YCR007CP25354 YNL266WYNL266W 420 nt0.19□□□□□ -2.38
YCR007CP25354 ATP8Q0080 147 nt0.18□□□□□ -2.38
YCR007CP25354 YBR178WYBR178W 375 nt0.18□□□□□ -2.38
YCR007CP25354 ESP1YGR098C 4893 nt0.17□□□□□ -2.38
YCR007CP25354 tD(GUC)QtD(GUC)Q 75 nt0.17□□□□□ -2.38
YCR007CP25354 SOV1YMR066W 2697 nt0.17□□□□□ -2.38
YCR007CP25354 RDS3YPR094W 324 nt0.16□□□□□ -2.38
YCR007CP25354 YKL145W-AYKL145W-A 93 nt0.15□□□□□ -2.39
YCR007CP25354 STF2YGR008C 255 nt0.13□□□□□ -2.39
YCR007CP25354 AI1Q0050 2505 nt0.1□□□□□ -2.39
YCR007CP25354 Q0092Q0092 141 nt0.1□□□□□ -2.39
YCR007CP25354 YBR196C-AYBR196C-A 150 nt0.1□□□□□ -2.39
YCR007CP25354 MLP2YIL149C 5040 nt0.08□□□□□ -2.4
YCR007CP25354 snR128snR128 126 nt0.08□□□□□ -2.4
YCR007CP25354 tF(GAA)BtF(GAA)B 73 nt0.07□□□□□ -2.4
YCR007CP25354 tF(GAA)FtF(GAA)F 73 nt0.07□□□□□ -2.4
YCR007CP25354 tF(GAA)GtF(GAA)G 73 nt0.07□□□□□ -2.4
YCR007CP25354 tF(GAA)H1tF(GAA)H1 73 nt0.07□□□□□ -2.4
YCR007CP25354 tF(GAA)H2tF(GAA)H2 73 nt0.07□□□□□ -2.4
YCR007CP25354 tF(GAA)MtF(GAA)M 73 nt0.07□□□□□ -2.4
YCR007CP25354 tF(GAA)P1tF(GAA)P1 73 nt0.07□□□□□ -2.4
YCR007CP25354 tF(GAA)P2tF(GAA)P2 73 nt0.07□□□□□ -2.4
YCR007CP25354 YLR286W-AYLR286W-A 135 nt0.07□□□□□ -2.4
YCR007CP25354 snR50snR50 90 nt0.07□□□□□ -2.4
YCR007CP25354 YDL159C-BYDL159C-B 177 nt0.06□□□□□ -2.4
YCR007CP25354 THO2YNL139C 4794 nt0.06□□□□□ -2.4
YCR007CP25354 YER090C-AYER090C-A 90 nt0.04□□□□□ -2.4
YCR007CP25354 YLR299C-AYLR299C-A 93 nt0□□□□□ -2.41
YCR007CP25354 YOL014WYOL014W 375 nt-0.01□□□□□ -2.41
YCR007CP25354 YML100W-AYML100W-A 174 nt-0.07□□□□□ -2.42
YCR007CP25354 YER078W-AYER078W-A 165 nt-0.08□□□□□ -2.42
YCR007CP25354 YNL103W-AYNL103W-A 90 nt-0.09□□□□□ -2.42
YCR007CP25354 YOL083C-AYOL083C-A 141 nt-0.11□□□□□ -2.43
YCR007CP25354 snR67snR67 82 nt-0.14□□□□□ -2.43
YCR007CP25354 snR45snR45 172 nt-0.14□□□□□ -2.43
YCR007CP25354 YML054C-AYML054C-A 159 nt-0.16□□□□□ -2.44
YCR007CP25354 YBL071C-BYBL071C-B 99 nt-0.17□□□□□ -2.44
YCR007CP25354 snR81snR81 201 nt-0.18□□□□□ -2.44
YCR007CP25354 YAL037C-AYAL037C-A 93 nt-0.18□□□□□ -2.44
YCR007CP25354 PAU9YBL108C-A 129 nt-0.18□□□□□ -2.44
YCR007CP25354 snR61snR61 90 nt-0.2□□□□□ -2.44
YCR007CP25354 SBH2YER019C-A 267 nt-0.2□□□□□ -2.44
YCR007CP25354 YGL041C-BYGL041C-B 183 nt-0.21□□□□□ -2.44
YCR007CP25354 YHR180C-BYHR180C-B 105 nt-0.21□□□□□ -2.44
YCR007CP25354 Q0143Q0143 153 nt-0.22□□□□□ -2.44
YCR007CP25354 YOL164W-AYOL164W-A 183 nt-0.24□□□□□ -2.45
YCR007CP25354 SKI7YOR076C 2244 nt-0.29□□□□□ -2.46
YCR007CP25354 TFB5YDR079C-A 219 nt-0.3□□□□□ -2.46
YCR007CP25354 tA(UGC)QtA(UGC)Q 76 nt-0.3□□□□□ -2.46
YCR007CP25354 snR47snR47 99 nt-0.34□□□□□ -2.46
YCR007CP25354 YBL100W-CYBL100W-C 120 nt-0.35□□□□□ -2.47
YCR007CP25354 YGR240C-AYGR240C-A 201 nt-0.38□□□□□ -2.47
YCR007CP25354 YBR109W-AYBR109W-A 225 nt-0.38□□□□□ -2.47
YCR007CP25354 snR85snR85 171 nt-0.39□□□□□ -2.47
YCR007CP25354 RPL41AYDL184C 78 nt-0.39□□□□□ -2.47
YCR007CP25354 YBR296C-AYBR296C-A 120 nt-0.42□□□□□ -2.48
YCR007CP25354 tS(GCU)Q1tS(GCU)Q1 86 nt-0.46□□□□□ -2.48
YCR007CP25354 YMR326CYMR326C 309 nt-0.47□□□□□ -2.48
YCR007CP25354 snR38snR38 95 nt-0.48□□□□□ -2.49
YCR007CP25354 YDR034C-AYDR034C-A 177 nt-0.53□□□□□ -2.49
YCR007CP25354 snR62snR62 100 nt-0.55□□□□□ -2.5
YCR007CP25354 YHR217CYHR217C 462 nt-0.56□□□□□ -2.5
YCR007CP25354 YBL109WYBL109W 336 nt-0.57□□□□□ -2.5
YCR007CP25354 snR161snR161 161 nt-0.57□□□□□ -2.5
YCR007CP25354 URB1YKL014C 5295 nt-0.59□□□□□ -2.5
YCR007CP25354 YKL106C-AYKL106C-A 120 nt-0.61□□□□□ -2.51
YCR007CP25354 YKL225WYKL225W 348 nt-0.61□□□□□ -2.51
YCR007CP25354 YOR376W-AYOR376W-A 156 nt-0.61□□□□□ -2.51
YCR007CP25354 YJL113WYJL113W 4647 nt-0.64□□□□□ -2.51
YCR007CP25354 YDR524C-AYDR524C-A 120 nt-0.71□□□□□ -2.52
YCR007CP25354 YLL066W-BYLL066W-B 171 nt-0.77□□□□□ -2.53
YCR007CP25354 snR33snR33 183 nt-0.77□□□□□ -2.53
YCR007CP25354 YOR316C-AYOR316C-A 210 nt-0.78□□□□□ -2.53
YCR007CP25354 snR64snR64 101 nt-0.84□□□□□ -2.54
YCR007CP25354 tT(UGU)G1tT(UGU)G1 72 nt-0.86□□□□□ -2.55
YCR007CP25354 tT(UGU)G2tT(UGU)G2 72 nt-0.86□□□□□ -2.55
YCR007CP25354 tT(UGU)PtT(UGU)P 72 nt-0.86□□□□□ -2.55
YCR007CP25354 YDL159W-AYDL159W-A 132 nt-0.9□□□□□ -2.55
YCR007CP25354 YDL247W-AYDL247W-A 75 nt-0.9□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 57.2 ms