Protein–RNA interactions for Protein: P22202

SSA4, Heat shock protein SSA4, yeastyeast

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSA4P22202 LTE1YAL024C 4308 nt1.36□□□□□ -2.19
SSA4P22202 YBR196C-AYBR196C-A 150 nt1.34□□□□□ -2.19
SSA4P22202 RKR1YMR247C 4689 nt1.33□□□□□ -2.2
SSA4P22202 BUL2YML111W 2763 nt1.33□□□□□ -2.2
SSA4P22202 YIL142C-AYIL142C-A 333 nt1.31□□□□□ -2.2
SSA4P22202 YKL145W-AYKL145W-A 93 nt1.31□□□□□ -2.2
SSA4P22202 tS(GCU)Q1tS(GCU)Q1 86 nt1.29□□□□□ -2.2
SSA4P22202 CSE1YGL238W 2883 nt1.26□□□□□ -2.21
SSA4P22202 NIP1YMR309C 2439 nt1.26□□□□□ -2.21
SSA4P22202 YMR160WYMR160W 2451 nt1.25□□□□□ -2.21
SSA4P22202 EST1YLR233C 2100 nt1.23□□□□□ -2.21
SSA4P22202 snR69snR69 101 nt1.22□□□□□ -2.21
SSA4P22202 tD(GUC)QtD(GUC)Q 75 nt1.22□□□□□ -2.21
SSA4P22202 YOL083C-AYOL083C-A 141 nt1.21□□□□□ -2.22
SSA4P22202 YBL071C-BYBL071C-B 99 nt1.19□□□□□ -2.22
SSA4P22202 RPS26AYGL189C 360 nt1.18□□□□□ -2.22
SSA4P22202 YJL077W-AYJL077W-A 87 nt1.18□□□□□ -2.22
SSA4P22202 VAM6YDL077C 3150 nt1.18□□□□□ -2.22
SSA4P22202 EMT1tM(CAU)D 73 nt1.17□□□□□ -2.22
SSA4P22202 EMT5tM(CAU)J1 73 nt1.17□□□□□ -2.22
SSA4P22202 EMT3tM(CAU)J2 73 nt1.17□□□□□ -2.22
SSA4P22202 EMT4tM(CAU)M 73 nt1.17□□□□□ -2.22
SSA4P22202 EMT2tM(CAU)O2 73 nt1.17□□□□□ -2.22
SSA4P22202 YLR286W-AYLR286W-A 135 nt1.17□□□□□ -2.22
SSA4P22202 YOR192C-BYOR192C-B 5313 nt1.15□□□□□ -2.22
SSA4P22202 PET111YMR257C 2403 nt1.14□□□□□ -2.23
SSA4P22202 RDS3YPR094W 324 nt1.14□□□□□ -2.23
SSA4P22202 BUD3YCL014W 4911 nt1.13□□□□□ -2.23
SSA4P22202 YDR371C-AYDR371C-A 105 nt1.11□□□□□ -2.23
SSA4P22202 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
SSA4P22202 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
SSA4P22202 snR62snR62 100 nt1.1□□□□□ -2.23
SSA4P22202 IQG1YPL242C 4488 nt1.08□□□□□ -2.24
SSA4P22202 MLP1YKR095W 5628 nt1.06□□□□□ -2.24
SSA4P22202 YOL164W-AYOL164W-A 183 nt1.06□□□□□ -2.24
SSA4P22202 YDL159C-BYDL159C-B 177 nt1.05□□□□□ -2.24
SSA4P22202 YLR299C-AYLR299C-A 93 nt1.05□□□□□ -2.24
SSA4P22202 YLL066W-BYLL066W-B 171 nt1.04□□□□□ -2.24
SSA4P22202 YBL100W-CYBL100W-C 120 nt1.04□□□□□ -2.24
SSA4P22202 BEM2YER155C 6504 nt1.02□□□□□ -2.25
SSA4P22202 snR45snR45 172 nt1.01□□□□□ -2.25
SSA4P22202 YNL054W-BYNL054W-B 5250 nt1□□□□□ -2.25
SSA4P22202 ORC3YLL004W 1851 nt0.98□□□□□ -2.25
SSA4P22202 YBL100W-BYBL100W-B 5313 nt0.97□□□□□ -2.25
SSA4P22202 YGR240C-AYGR240C-A 201 nt0.96□□□□□ -2.26
SSA4P22202 AI1Q0050 2505 nt0.95□□□□□ -2.26
SSA4P22202 tQ(UUG)QtQ(UUG)Q 76 nt0.94□□□□□ -2.26
SSA4P22202 tT(AGU)BtT(AGU)B 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)CtT(AGU)C 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)DtT(AGU)D 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)HtT(AGU)H 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)I1tT(AGU)I1 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)I2tT(AGU)I2 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)JtT(AGU)J 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)N1tT(AGU)N1 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)N2tT(AGU)N2 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)O1tT(AGU)O1 73 nt0.9□□□□□ -2.27
SSA4P22202 tT(AGU)O2tT(AGU)O2 73 nt0.9□□□□□ -2.27
SSA4P22202 FMP27YLR454W 7887 nt0.88□□□□□ -2.27
SSA4P22202 THO2YNL139C 4794 nt0.87□□□□□ -2.27
SSA4P22202 YDR034C-AYDR034C-A 177 nt0.87□□□□□ -2.27
SSA4P22202 YPR159C-AYPR159C-A 102 nt0.87□□□□□ -2.27
SSA4P22202 YER078W-AYER078W-A 165 nt0.86□□□□□ -2.27
SSA4P22202 YER090C-AYER090C-A 90 nt0.86□□□□□ -2.27
SSA4P22202 snR47snR47 99 nt0.84□□□□□ -2.27
SSA4P22202 YML054C-AYML054C-A 159 nt0.78□□□□□ -2.28
SSA4P22202 MLP2YIL149C 5040 nt0.77□□□□□ -2.29
SSA4P22202 YOR186C-AYOR186C-A 210 nt0.77□□□□□ -2.29
SSA4P22202 YHR180C-BYHR180C-B 105 nt0.76□□□□□ -2.29
SSA4P22202 snR50snR50 90 nt0.75□□□□□ -2.29
SSA4P22202 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
SSA4P22202 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
SSA4P22202 YBR109W-AYBR109W-A 225 nt0.66□□□□□ -2.3
SSA4P22202 RPL41AYDL184C 78 nt0.62□□□□□ -2.31
SSA4P22202 YBR296C-AYBR296C-A 120 nt0.61□□□□□ -2.31
SSA4P22202 snR67snR67 82 nt0.59□□□□□ -2.31
SSA4P22202 MYO1YHR023W 5787 nt0.58□□□□□ -2.32
SSA4P22202 ESP1YGR098C 4893 nt0.56□□□□□ -2.32
SSA4P22202 SOV1YMR066W 2697 nt0.55□□□□□ -2.32
SSA4P22202 YKL225WYKL225W 348 nt0.54□□□□□ -2.32
SSA4P22202 snR38snR38 95 nt0.52□□□□□ -2.33
SSA4P22202 snR64snR64 101 nt0.49□□□□□ -2.33
SSA4P22202 YML100W-AYML100W-A 174 nt0.46□□□□□ -2.34
SSA4P22202 YOL013W-AYOL013W-A 192 nt0.44□□□□□ -2.34
SSA4P22202 snR53snR53 91 nt0.4□□□□□ -2.35
SSA4P22202 YJL113WYJL113W 4647 nt0.34□□□□□ -2.35
SSA4P22202 snR128snR128 126 nt0.32□□□□□ -2.36
SSA4P22202 SKI7YOR076C 2244 nt0.28□□□□□ -2.36
SSA4P22202 YKL106C-AYKL106C-A 120 nt0.08□□□□□ -2.4
SSA4P22202 YDL159W-AYDL159W-A 132 nt0.07□□□□□ -2.4
SSA4P22202 PAU9YBL108C-A 129 nt0.02□□□□□ -2.41
SSA4P22202 YGR122C-AYGR122C-A 129 nt0□□□□□ -2.41
SSA4P22202 tA(UGC)QtA(UGC)Q 76 nt-0.06□□□□□ -2.42
SSA4P22202 YOR376W-AYOR376W-A 156 nt-0.09□□□□□ -2.42
SSA4P22202 YNR077CYNR077C 255 nt-0.1□□□□□ -2.43
SSA4P22202 YLR149C-AYLR149C-A 87 nt-0.14□□□□□ -2.43
SSA4P22202 SBH2YER019C-A 267 nt-0.18□□□□□ -2.44
SSA4P22202 YOR316C-AYOR316C-A 210 nt-0.18□□□□□ -2.44
SSA4P22202 YDL114W-AYDL114W-A 114 nt-0.28□□□□□ -2.45
SSA4P22202 tV(UAC)QtV(UAC)Q 76 nt-0.32□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 48.9 ms