Protein–RNA interactions for Protein: P16140

VMA2, V-type proton ATPase subunit B, yeastyeast

Known RBP Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA2P16140 YOR170WYOR170W 306 nt-0.34□□□□□ -2.46
VMA2P16140 tM(CAU)Q2tM(CAU)Q2 78 nt-0.35□□□□□ -2.47
VMA2P16140 YJL077W-AYJL077W-A 87 nt-0.37□□□□□ -2.47
VMA2P16140 tQ(UUG)QtQ(UUG)Q 76 nt-0.38□□□□□ -2.47
VMA2P16140 snR46snR46 197 nt-0.38□□□□□ -2.47
VMA2P16140 snR80snR80 171 nt-0.39□□□□□ -2.47
VMA2P16140 snR69snR69 101 nt-0.4□□□□□ -2.47
VMA2P16140 YML100W-AYML100W-A 174 nt-0.4□□□□□ -2.47
VMA2P16140 YOR329W-AYOR329W-A 210 nt-0.4□□□□□ -2.47
VMA2P16140 snR39BsnR39B 96 nt-0.4□□□□□ -2.47
VMA2P16140 YGR146C-AYGR146C-A 162 nt-0.41□□□□□ -2.48
VMA2P16140 YIL071W-AYIL071W-A 477 nt-0.42□□□□□ -2.48
VMA2P16140 snR52snR52 92 nt-0.43□□□□□ -2.48
VMA2P16140 YDL007C-AYDL007C-A 258 nt-0.44□□□□□ -2.48
VMA2P16140 PMP2YEL017C-A 132 nt-0.46□□□□□ -2.48
VMA2P16140 YNL067W-BYNL067W-B 141 nt-0.47□□□□□ -2.48
VMA2P16140 PAU9YBL108C-A 129 nt-0.48□□□□□ -2.49
VMA2P16140 SEC10YLR166C 2616 nt-0.48□□□□□ -2.49
VMA2P16140 tA(UGC)QtA(UGC)Q 76 nt-0.49□□□□□ -2.49
VMA2P16140 YLR342W-AYLR342W-A 174 nt-0.49□□□□□ -2.49
VMA2P16140 RDS3YPR094W 324 nt-0.49□□□□□ -2.49
VMA2P16140 YER090C-AYER090C-A 90 nt-0.5□□□□□ -2.49
VMA2P16140 snR48snR48 113 nt-0.5□□□□□ -2.49
VMA2P16140 Q0142Q0142 177 nt-0.51□□□□□ -2.49
VMA2P16140 snR50snR50 90 nt-0.51□□□□□ -2.49
VMA2P16140 YNL266WYNL266W 420 nt-0.53□□□□□ -2.49
VMA2P16140 tL(UAA)QtL(UAA)Q 85 nt-0.54□□□□□ -2.5
VMA2P16140 JLP2YMR132C 627 nt-0.54□□□□□ -2.5
VMA2P16140 URB1YKL014C 5295 nt-0.55□□□□□ -2.5
VMA2P16140 tD(GUC)QtD(GUC)Q 75 nt-0.57□□□□□ -2.5
VMA2P16140 YNL205CYNL205C 423 nt-0.59□□□□□ -2.5
VMA2P16140 YBR178WYBR178W 375 nt-0.6□□□□□ -2.51
VMA2P16140 YHL015W-AYHL015W-A 84 nt-0.61□□□□□ -2.51
VMA2P16140 YLR286W-AYLR286W-A 135 nt-0.61□□□□□ -2.51
VMA2P16140 YOR102WYOR102W 351 nt-0.61□□□□□ -2.51
VMA2P16140 YHL009W-BYHL009W-B 5409 nt-0.61□□□□□ -2.51
VMA2P16140 YDR406W-AYDR406W-A 246 nt-0.62□□□□□ -2.51
VMA2P16140 YDL159C-BYDL159C-B 177 nt-0.66□□□□□ -2.52
VMA2P16140 snR67snR67 82 nt-0.68□□□□□ -2.52
VMA2P16140 YNL198CYNL198C 303 nt-0.69□□□□□ -2.52
VMA2P16140 YJL150WYJL150W 303 nt-0.7□□□□□ -2.52
VMA2P16140 snR33snR33 183 nt-0.72□□□□□ -2.52
VMA2P16140 YBL053WYBL053W 375 nt-0.75□□□□□ -2.53
VMA2P16140 SKI7YOR076C 2244 nt-0.75□□□□□ -2.53
VMA2P16140 YLR299C-AYLR299C-A 93 nt-0.77□□□□□ -2.53
VMA2P16140 YBR196C-AYBR196C-A 150 nt-0.78□□□□□ -2.53
VMA2P16140 YMR046W-AYMR046W-A 129 nt-0.79□□□□□ -2.54
VMA2P16140 tT(UGU)G1tT(UGU)G1 72 nt-0.8□□□□□ -2.54
VMA2P16140 tT(UGU)G2tT(UGU)G2 72 nt-0.8□□□□□ -2.54
VMA2P16140 tT(UGU)PtT(UGU)P 72 nt-0.8□□□□□ -2.54
VMA2P16140 snR161snR161 161 nt-0.81□□□□□ -2.54
VMA2P16140 SPG3YDR504C 384 nt-0.82□□□□□ -2.54
VMA2P16140 SOM1YEL059C-A 225 nt-0.85□□□□□ -2.55
VMA2P16140 YCR095W-AYCR095W-A 159 nt-0.92□□□□□ -2.56
VMA2P16140 YML054C-AYML054C-A 159 nt-0.92□□□□□ -2.56
VMA2P16140 tM(CAU)Q1tM(CAU)Q1 76 nt-0.95□□□□□ -2.56
VMA2P16140 YHR180C-BYHR180C-B 105 nt-0.98□□□□□ -2.57
VMA2P16140 YNR077CYNR077C 255 nt-0.98□□□□□ -2.57
VMA2P16140 tP(UGG)QtP(UGG)Q 72 nt-0.99□□□□□ -2.57
VMA2P16140 YLR466C-BYLR466C-B 117 nt-1□□□□□ -2.57
VMA2P16140 YGR151CYGR151C 336 nt-1.06□□□□□ -2.58
VMA2P16140 YNL338WYNL338W 159 nt-1.08□□□□□ -2.58
VMA2P16140 YOR376W-AYOR376W-A 156 nt-1.09□□□□□ -2.58
VMA2P16140 YBR223W-AYBR223W-A 120 nt-1.11□□□□□ -2.59
VMA2P16140 YCL001W-BYCL001W-B 255 nt-1.11□□□□□ -2.59
VMA2P16140 snR77snR77 88 nt-1.13□□□□□ -2.59
VMA2P16140 CDC65tQ(CUG)M 72 nt-1.14□□□□□ -2.59
VMA2P16140 YGR240C-AYGR240C-A 201 nt-1.15□□□□□ -2.59
VMA2P16140 YOL083C-AYOL083C-A 141 nt-1.15□□□□□ -2.59
VMA2P16140 YBL071C-BYBL071C-B 99 nt-1.18□□□□□ -2.6
VMA2P16140 YBR109W-AYBR109W-A 225 nt-1.18□□□□□ -2.6
VMA2P16140 RPL41AYDL184C 78 nt-1.2□□□□□ -2.6
VMA2P16140 YKL106C-AYKL106C-A 120 nt-1.2□□□□□ -2.6
VMA2P16140 YBR296C-AYBR296C-A 120 nt-1.21□□□□□ -2.6
VMA2P16140 YOL164W-AYOL164W-A 183 nt-1.23□□□□□ -2.61
VMA2P16140 YOR316C-AYOR316C-A 210 nt-1.24□□□□□ -2.61
VMA2P16140 snR38snR38 95 nt-1.26□□□□□ -2.61
VMA2P16140 YAL037C-AYAL037C-A 93 nt-1.27□□□□□ -2.61
VMA2P16140 YNL337WYNL337W 255 nt-1.28□□□□□ -2.61
VMA2P16140 YMR315W-AYMR315W-A 108 nt-1.29□□□□□ -2.62
VMA2P16140 snR47snR47 99 nt-1.31□□□□□ -2.62
VMA2P16140 snR81snR81 201 nt-1.32□□□□□ -2.62
VMA2P16140 Q0032Q0032 291 nt-1.36□□□□□ -2.63
VMA2P16140 tY(GUA)QtY(GUA)Q 84 nt-1.37□□□□□ -2.63
VMA2P16140 YBL100W-CYBL100W-C 120 nt-1.38□□□□□ -2.63
VMA2P16140 YGL007C-AYGL007C-A 87 nt-1.39□□□□□ -2.63
VMA2P16140 tS(GCU)Q1tS(GCU)Q1 86 nt-1.49□□□□□ -2.65
VMA2P16140 YKL225WYKL225W 348 nt-1.53□□□□□ -2.65
VMA2P16140 YNL103W-AYNL103W-A 90 nt-1.54□□□□□ -2.66
VMA2P16140 YGL041C-BYGL041C-B 183 nt-1.55□□□□□ -2.66
VMA2P16140 YOR309CYOR309C 381 nt-1.58□□□□□ -2.66
VMA2P16140 snR61snR61 90 nt-1.61□□□□□ -2.67
VMA2P16140 YLR294CYLR294C 330 nt-1.64□□□□□ -2.67
VMA2P16140 snR6snR6 112 nt-1.66□□□□□ -2.68
VMA2P16140 YOR225WYOR225W 330 nt-1.66□□□□□ -2.68
VMA2P16140 YDR034C-AYDR034C-A 177 nt-1.67□□□□□ -2.68
VMA2P16140 YNL170WYNL170W 396 nt-1.69□□□□□ -2.68
VMA2P16140 YDL114W-AYDL114W-A 114 nt-1.72□□□□□ -2.68
VMA2P16140 tV(UAC)QtV(UAC)Q 76 nt-1.73□□□□□ -2.69
VMA2P16140 snR62snR62 100 nt-1.75□□□□□ -2.69
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms