Protein–RNA interactions for Protein: P0CX62

TY2A-GR2, Transposon Ty2-GR2 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-GR2P0CX62 tL(UAA)QtL(UAA)Q 85 nt0.5□□□□□ -2.33
TY2A-GR2P0CX62 QCR9YGR183C 201 nt0.5□□□□□ -2.33
TY2A-GR2P0CX62 snR39BsnR39B 96 nt0.49□□□□□ -2.33
TY2A-GR2P0CX62 YOR225WYOR225W 330 nt0.48□□□□□ -2.33
TY2A-GR2P0CX62 RCO1YMR075W 2055 nt0.47□□□□□ -2.33
TY2A-GR2P0CX62 FMP27YLR454W 7887 nt0.46□□□□□ -2.34
TY2A-GR2P0CX62 YGR146C-AYGR146C-A 162 nt0.44□□□□□ -2.34
TY2A-GR2P0CX62 YKL145W-AYKL145W-A 93 nt0.44□□□□□ -2.34
TY2A-GR2P0CX62 MLP2YIL149C 5040 nt0.44□□□□□ -2.34
TY2A-GR2P0CX62 YBL053WYBL053W 375 nt0.43□□□□□ -2.34
TY2A-GR2P0CX62 YNL067W-BYNL067W-B 141 nt0.43□□□□□ -2.34
TY2A-GR2P0CX62 BIR1YJR089W 2865 nt0.43□□□□□ -2.34
TY2A-GR2P0CX62 YBL100W-BYBL100W-B 5313 nt0.42□□□□□ -2.34
TY2A-GR2P0CX62 YOR186C-AYOR186C-A 210 nt0.4□□□□□ -2.35
TY2A-GR2P0CX62 YOL014WYOL014W 375 nt0.38□□□□□ -2.35
TY2A-GR2P0CX62 YBR099CYBR099C 384 nt0.37□□□□□ -2.35
TY2A-GR2P0CX62 YLR294CYLR294C 330 nt0.36□□□□□ -2.35
TY2A-GR2P0CX62 AI1Q0050 2505 nt0.33□□□□□ -2.36
TY2A-GR2P0CX62 YPL060C-AYPL060C-A 3315 nt0.32□□□□□ -2.36
TY2A-GR2P0CX62 YNL205CYNL205C 423 nt0.3□□□□□ -2.36
TY2A-GR2P0CX62 YJL077W-AYJL077W-A 87 nt0.27□□□□□ -2.37
TY2A-GR2P0CX62 YOL013W-AYOL013W-A 192 nt0.27□□□□□ -2.37
TY2A-GR2P0CX62 ESP1YGR098C 4893 nt0.26□□□□□ -2.37
TY2A-GR2P0CX62 EST1YLR233C 2100 nt0.26□□□□□ -2.37
TY2A-GR2P0CX62 PMP2YEL017C-A 132 nt0.25□□□□□ -2.37
TY2A-GR2P0CX62 YNL054W-BYNL054W-B 5250 nt0.23□□□□□ -2.37
TY2A-GR2P0CX62 YCR095W-AYCR095W-A 159 nt0.23□□□□□ -2.37
TY2A-GR2P0CX62 SOM1YEL059C-A 225 nt0.23□□□□□ -2.37
TY2A-GR2P0CX62 snR69snR69 101 nt0.22□□□□□ -2.37
TY2A-GR2P0CX62 YGR164WYGR164W 336 nt0.21□□□□□ -2.38
TY2A-GR2P0CX62 SEC10YLR166C 2616 nt0.17□□□□□ -2.38
TY2A-GR2P0CX62 SOV1YMR066W 2697 nt0.16□□□□□ -2.38
TY2A-GR2P0CX62 YER078W-AYER078W-A 165 nt0.15□□□□□ -2.39
TY2A-GR2P0CX62 tQ(UUG)QtQ(UUG)Q 76 nt0.15□□□□□ -2.39
TY2A-GR2P0CX62 THO2YNL139C 4794 nt0.14□□□□□ -2.39
TY2A-GR2P0CX62 RDS3YPR094W 324 nt0.14□□□□□ -2.39
TY2A-GR2P0CX62 YCL001W-BYCL001W-B 255 nt0.13□□□□□ -2.39
TY2A-GR2P0CX62 tD(GUC)QtD(GUC)Q 75 nt0.12□□□□□ -2.39
TY2A-GR2P0CX62 YNL266WYNL266W 420 nt0.12□□□□□ -2.39
TY2A-GR2P0CX62 YIL071W-AYIL071W-A 477 nt0.08□□□□□ -2.4
TY2A-GR2P0CX62 snR128snR128 126 nt0.08□□□□□ -2.4
TY2A-GR2P0CX62 YBR178WYBR178W 375 nt0.05□□□□□ -2.4
TY2A-GR2P0CX62 YBR196C-AYBR196C-A 150 nt0.04□□□□□ -2.4
TY2A-GR2P0CX62 YNL170WYNL170W 396 nt0.02□□□□□ -2.41
TY2A-GR2P0CX62 YER090C-AYER090C-A 90 nt0.01□□□□□ -2.41
TY2A-GR2P0CX62 YLR286W-AYLR286W-A 135 nt0.01□□□□□ -2.41
TY2A-GR2P0CX62 snR45snR45 172 nt0□□□□□ -2.41
TY2A-GR2P0CX62 YDL159C-BYDL159C-B 177 nt-0.01□□□□□ -2.41
TY2A-GR2P0CX62 ATP8Q0080 147 nt-0.02□□□□□ -2.41
TY2A-GR2P0CX62 snR50snR50 90 nt-0.07□□□□□ -2.42
TY2A-GR2P0CX62 YLR299C-AYLR299C-A 93 nt-0.09□□□□□ -2.42
TY2A-GR2P0CX62 YML100W-AYML100W-A 174 nt-0.09□□□□□ -2.42
TY2A-GR2P0CX62 Q0092Q0092 141 nt-0.14□□□□□ -2.43
TY2A-GR2P0CX62 SBH2YER019C-A 267 nt-0.18□□□□□ -2.44
TY2A-GR2P0CX62 TFB5YDR079C-A 219 nt-0.19□□□□□ -2.44
TY2A-GR2P0CX62 PAU9YBL108C-A 129 nt-0.19□□□□□ -2.44
TY2A-GR2P0CX62 snR67snR67 82 nt-0.21□□□□□ -2.44
TY2A-GR2P0CX62 tA(UGC)QtA(UGC)Q 76 nt-0.25□□□□□ -2.45
TY2A-GR2P0CX62 SKI7YOR076C 2244 nt-0.28□□□□□ -2.45
TY2A-GR2P0CX62 YML054C-AYML054C-A 159 nt-0.28□□□□□ -2.45
TY2A-GR2P0CX62 YAL037C-AYAL037C-A 93 nt-0.29□□□□□ -2.46
TY2A-GR2P0CX62 YOL083C-AYOL083C-A 141 nt-0.3□□□□□ -2.46
TY2A-GR2P0CX62 YJL113WYJL113W 4647 nt-0.32□□□□□ -2.46
TY2A-GR2P0CX62 YHR180C-BYHR180C-B 105 nt-0.33□□□□□ -2.46
TY2A-GR2P0CX62 YNL103W-AYNL103W-A 90 nt-0.34□□□□□ -2.46
TY2A-GR2P0CX62 YBL071C-BYBL071C-B 99 nt-0.35□□□□□ -2.47
TY2A-GR2P0CX62 snR61snR61 90 nt-0.36□□□□□ -2.47
TY2A-GR2P0CX62 snR81snR81 201 nt-0.37□□□□□ -2.47
TY2A-GR2P0CX62 snR161snR161 161 nt-0.41□□□□□ -2.48
TY2A-GR2P0CX62 YOL164W-AYOL164W-A 183 nt-0.42□□□□□ -2.48
TY2A-GR2P0CX62 YGL041C-BYGL041C-B 183 nt-0.43□□□□□ -2.48
TY2A-GR2P0CX62 URB1YKL014C 5295 nt-0.44□□□□□ -2.48
TY2A-GR2P0CX62 YBR109W-AYBR109W-A 225 nt-0.44□□□□□ -2.48
TY2A-GR2P0CX62 snR33snR33 183 nt-0.45□□□□□ -2.48
TY2A-GR2P0CX62 YBL100W-CYBL100W-C 120 nt-0.46□□□□□ -2.48
TY2A-GR2P0CX62 snR47snR47 99 nt-0.46□□□□□ -2.48
TY2A-GR2P0CX62 Q0143Q0143 153 nt-0.47□□□□□ -2.48
TY2A-GR2P0CX62 YOR376W-AYOR376W-A 156 nt-0.47□□□□□ -2.48
TY2A-GR2P0CX62 snR38snR38 95 nt-0.47□□□□□ -2.48
TY2A-GR2P0CX62 RPL41AYDL184C 78 nt-0.49□□□□□ -2.49
TY2A-GR2P0CX62 YBR296C-AYBR296C-A 120 nt-0.5□□□□□ -2.49
TY2A-GR2P0CX62 YGR240C-AYGR240C-A 201 nt-0.52□□□□□ -2.49
TY2A-GR2P0CX62 tS(GCU)Q1tS(GCU)Q1 86 nt-0.52□□□□□ -2.49
TY2A-GR2P0CX62 tP(UGG)QtP(UGG)Q 72 nt-0.55□□□□□ -2.5
TY2A-GR2P0CX62 tT(UGU)G1tT(UGU)G1 72 nt-0.55□□□□□ -2.5
TY2A-GR2P0CX62 tT(UGU)G2tT(UGU)G2 72 nt-0.55□□□□□ -2.5
TY2A-GR2P0CX62 tT(UGU)PtT(UGU)P 72 nt-0.55□□□□□ -2.5
TY2A-GR2P0CX62 YKL106C-AYKL106C-A 120 nt-0.56□□□□□ -2.5
TY2A-GR2P0CX62 snR77snR77 88 nt-0.57□□□□□ -2.5
TY2A-GR2P0CX62 YHL009W-BYHL009W-B 5409 nt-0.6□□□□□ -2.5
TY2A-GR2P0CX62 YOR316C-AYOR316C-A 210 nt-0.63□□□□□ -2.51
TY2A-GR2P0CX62 CDC65tQ(CUG)M 72 nt-0.64□□□□□ -2.51
TY2A-GR2P0CX62 YKL225WYKL225W 348 nt-0.64□□□□□ -2.51
TY2A-GR2P0CX62 YDR034C-AYDR034C-A 177 nt-0.65□□□□□ -2.51
TY2A-GR2P0CX62 snR85snR85 171 nt-0.68□□□□□ -2.52
TY2A-GR2P0CX62 YMR326CYMR326C 309 nt-0.69□□□□□ -2.52
TY2A-GR2P0CX62 snR62snR62 100 nt-0.7□□□□□ -2.52
TY2A-GR2P0CX62 YMR315W-AYMR315W-A 108 nt-0.7□□□□□ -2.52
TY2A-GR2P0CX62 YDL159W-AYDL159W-A 132 nt-0.75□□□□□ -2.53
TY2A-GR2P0CX62 YHR217CYHR217C 462 nt-0.8□□□□□ -2.54
Retrieved 100 of 7,029 protein–RNA pairs in 9.6 ms