Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Gm4974-201ENSMUST00000209974 875 ntBASIC15.29■□□□□ 0.04
Trav10A0A075B642 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.29■□□□□ 0.04
Trav10A0A075B642 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav10A0A075B642 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav10A0A075B642 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.28■□□□□ 0.04
Trav10A0A075B642 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav10A0A075B642 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.27■□□□□ 0.04
Trav10A0A075B642 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav10A0A075B642 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav10A0A075B642 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trav10A0A075B642 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav10A0A075B642 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav10A0A075B642 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav10A0A075B642 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav10A0A075B642 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.27■□□□□ 0.03
Trav10A0A075B642 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.26■□□□□ 0.03
Trav10A0A075B642 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Gm22240-201ENSMUST00000175225 82 ntBASIC15.26■□□□□ 0.03
Trav10A0A075B642 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav10A0A075B642 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav10A0A075B642 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms