Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.32■■□□□ 1
Cldn13Q9Z0S4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cldn13Q9Z0S4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cldn13Q9Z0S4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cldn13Q9Z0S4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cldn13Q9Z0S4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn13Q9Z0S4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn13Q9Z0S4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cldn13Q9Z0S4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cldn13Q9Z0S4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn13Q9Z0S4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn13Q9Z0S4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn13Q9Z0S4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn13Q9Z0S4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn13Q9Z0S4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cldn13Q9Z0S4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn13Q9Z0S4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn13Q9Z0S4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn13Q9Z0S4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn13Q9Z0S4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn13Q9Z0S4 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.24■□□□□ 0.99
Cldn13Q9Z0S4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.24■□□□□ 0.99
Cldn13Q9Z0S4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn13Q9Z0S4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn13Q9Z0S4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn13Q9Z0S4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.23■□□□□ 0.99
Cldn13Q9Z0S4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn13Q9Z0S4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cldn13Q9Z0S4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn13Q9Z0S4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn13Q9Z0S4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn13Q9Z0S4 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.22■□□□□ 0.99
Cldn13Q9Z0S4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn13Q9Z0S4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn13Q9Z0S4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn13Q9Z0S4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cldn13Q9Z0S4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn13Q9Z0S4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn13Q9Z0S4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn13Q9Z0S4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.18■□□□□ 0.98
Cldn13Q9Z0S4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn13Q9Z0S4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cldn13Q9Z0S4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Cldn13Q9Z0S4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Cldn13Q9Z0S4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn13Q9Z0S4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Cldn13Q9Z0S4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cldn13Q9Z0S4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.14■□□□□ 0.97
Cldn13Q9Z0S4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Cldn13Q9Z0S4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn13Q9Z0S4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn13Q9Z0S4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn13Q9Z0S4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn13Q9Z0S4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.13■□□□□ 0.97
Cldn13Q9Z0S4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn13Q9Z0S4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cldn13Q9Z0S4 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.12■□□□□ 0.97
Cldn13Q9Z0S4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn13Q9Z0S4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn13Q9Z0S4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Cldn13Q9Z0S4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn13Q9Z0S4 Gm6821-201ENSMUST00000107540 542 ntBASIC21.11■□□□□ 0.97
Cldn13Q9Z0S4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn13Q9Z0S4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn13Q9Z0S4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cldn13Q9Z0S4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn13Q9Z0S4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cldn13Q9Z0S4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.1■□□□□ 0.97
Cldn13Q9Z0S4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn13Q9Z0S4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn13Q9Z0S4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn13Q9Z0S4 Gm8503-201ENSMUST00000118131 455 ntBASIC21.08■□□□□ 0.97
Cldn13Q9Z0S4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn13Q9Z0S4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn13Q9Z0S4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn13Q9Z0S4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
Cldn13Q9Z0S4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.08■□□□□ 0.96
Cldn13Q9Z0S4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Cldn13Q9Z0S4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn13Q9Z0S4 Nkain2-201ENSMUST00000092602 558 ntBASIC21.06■□□□□ 0.96
Cldn13Q9Z0S4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn13Q9Z0S4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.05■□□□□ 0.96
Cldn13Q9Z0S4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Cldn13Q9Z0S4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn13Q9Z0S4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn13Q9Z0S4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn13Q9Z0S4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn13Q9Z0S4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.04■□□□□ 0.96
Cldn13Q9Z0S4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cldn13Q9Z0S4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cldn13Q9Z0S4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn13Q9Z0S4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn13Q9Z0S4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn13Q9Z0S4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cldn13Q9Z0S4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn13Q9Z0S4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.01■□□□□ 0.95
Cldn13Q9Z0S4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Cldn13Q9Z0S4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cldn13Q9Z0S4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn13Q9Z0S4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms