Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RlimQ9WTV7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RlimQ9WTV7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RlimQ9WTV7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RlimQ9WTV7 Gm24970-201ENSMUST00000175582 82 ntBASIC21.69■■□□□ 1.06
RlimQ9WTV7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RlimQ9WTV7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RlimQ9WTV7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RlimQ9WTV7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RlimQ9WTV7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RlimQ9WTV7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RlimQ9WTV7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RlimQ9WTV7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RlimQ9WTV7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.66■■□□□ 1.06
RlimQ9WTV7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RlimQ9WTV7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RlimQ9WTV7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RlimQ9WTV7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RlimQ9WTV7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RlimQ9WTV7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RlimQ9WTV7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
RlimQ9WTV7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.64■■□□□ 1.05
RlimQ9WTV7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.63■■□□□ 1.05
RlimQ9WTV7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.63■■□□□ 1.05
RlimQ9WTV7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RlimQ9WTV7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RlimQ9WTV7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.63■■□□□ 1.05
RlimQ9WTV7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RlimQ9WTV7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RlimQ9WTV7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RlimQ9WTV7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RlimQ9WTV7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RlimQ9WTV7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RlimQ9WTV7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RlimQ9WTV7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RlimQ9WTV7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RlimQ9WTV7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RlimQ9WTV7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.61■■□□□ 1.05
RlimQ9WTV7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RlimQ9WTV7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.61■■□□□ 1.05
RlimQ9WTV7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RlimQ9WTV7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RlimQ9WTV7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RlimQ9WTV7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.6■■□□□ 1.05
RlimQ9WTV7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
RlimQ9WTV7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RlimQ9WTV7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RlimQ9WTV7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RlimQ9WTV7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RlimQ9WTV7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RlimQ9WTV7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RlimQ9WTV7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RlimQ9WTV7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RlimQ9WTV7 Gm45855-201ENSMUST00000212546 880 ntBASIC21.58■■□□□ 1.05
RlimQ9WTV7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RlimQ9WTV7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
RlimQ9WTV7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RlimQ9WTV7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RlimQ9WTV7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RlimQ9WTV7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RlimQ9WTV7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RlimQ9WTV7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RlimQ9WTV7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RlimQ9WTV7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RlimQ9WTV7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
RlimQ9WTV7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RlimQ9WTV7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RlimQ9WTV7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
RlimQ9WTV7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RlimQ9WTV7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RlimQ9WTV7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RlimQ9WTV7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RlimQ9WTV7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RlimQ9WTV7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RlimQ9WTV7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RlimQ9WTV7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RlimQ9WTV7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RlimQ9WTV7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RlimQ9WTV7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RlimQ9WTV7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.46■■□□□ 1.03
RlimQ9WTV7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RlimQ9WTV7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
RlimQ9WTV7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RlimQ9WTV7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RlimQ9WTV7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
RlimQ9WTV7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.45■■□□□ 1.02
RlimQ9WTV7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RlimQ9WTV7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RlimQ9WTV7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RlimQ9WTV7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RlimQ9WTV7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RlimQ9WTV7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RlimQ9WTV7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RlimQ9WTV7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RlimQ9WTV7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RlimQ9WTV7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RlimQ9WTV7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RlimQ9WTV7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.4■■□□□ 1.02
RlimQ9WTV7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RlimQ9WTV7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms