Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Herpud1Q9JJK5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Herpud1Q9JJK5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud1Q9JJK5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Herpud1Q9JJK5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Herpud1Q9JJK5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Herpud1Q9JJK5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.73■□□□□ 0.75
Herpud1Q9JJK5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud1Q9JJK5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud1Q9JJK5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.72■□□□□ 0.75
Herpud1Q9JJK5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Herpud1Q9JJK5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Herpud1Q9JJK5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Herpud1Q9JJK5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.71■□□□□ 0.75
Herpud1Q9JJK5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.71■□□□□ 0.75
Herpud1Q9JJK5 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.71■□□□□ 0.75
Herpud1Q9JJK5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Herpud1Q9JJK5 Gm9397-201ENSMUST00000200125 605 ntBASIC19.7■□□□□ 0.74
Herpud1Q9JJK5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Herpud1Q9JJK5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.7■□□□□ 0.74
Herpud1Q9JJK5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Herpud1Q9JJK5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Herpud1Q9JJK5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.68■□□□□ 0.74
Herpud1Q9JJK5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.68■□□□□ 0.74
Herpud1Q9JJK5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud1Q9JJK5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Herpud1Q9JJK5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Herpud1Q9JJK5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Herpud1Q9JJK5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Herpud1Q9JJK5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Herpud1Q9JJK5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Herpud1Q9JJK5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Herpud1Q9JJK5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Herpud1Q9JJK5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Herpud1Q9JJK5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Herpud1Q9JJK5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Herpud1Q9JJK5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.65■□□□□ 0.74
Herpud1Q9JJK5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud1Q9JJK5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud1Q9JJK5 Gm24970-201ENSMUST00000175582 82 ntBASIC19.64■□□□□ 0.73
Herpud1Q9JJK5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.64■□□□□ 0.73
Herpud1Q9JJK5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud1Q9JJK5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud1Q9JJK5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud1Q9JJK5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herpud1Q9JJK5 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.63■□□□□ 0.73
Herpud1Q9JJK5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Herpud1Q9JJK5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.62■□□□□ 0.73
Herpud1Q9JJK5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud1Q9JJK5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud1Q9JJK5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Herpud1Q9JJK5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud1Q9JJK5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herpud1Q9JJK5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.61■□□□□ 0.73
Herpud1Q9JJK5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud1Q9JJK5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud1Q9JJK5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud1Q9JJK5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.59■□□□□ 0.73
Herpud1Q9JJK5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Herpud1Q9JJK5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.59■□□□□ 0.73
Herpud1Q9JJK5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herpud1Q9JJK5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herpud1Q9JJK5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Herpud1Q9JJK5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Herpud1Q9JJK5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.58■□□□□ 0.72
Herpud1Q9JJK5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herpud1Q9JJK5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud1Q9JJK5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.57■□□□□ 0.72
Herpud1Q9JJK5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud1Q9JJK5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud1Q9JJK5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Herpud1Q9JJK5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud1Q9JJK5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud1Q9JJK5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Herpud1Q9JJK5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Herpud1Q9JJK5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Herpud1Q9JJK5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Herpud1Q9JJK5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Herpud1Q9JJK5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Herpud1Q9JJK5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Herpud1Q9JJK5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.53■□□□□ 0.72
Herpud1Q9JJK5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Herpud1Q9JJK5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Herpud1Q9JJK5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herpud1Q9JJK5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herpud1Q9JJK5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Herpud1Q9JJK5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Herpud1Q9JJK5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Herpud1Q9JJK5 Gm45855-201ENSMUST00000212546 880 ntBASIC19.51■□□□□ 0.71
Herpud1Q9JJK5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Herpud1Q9JJK5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms