Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lime1Q9EQR5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lime1Q9EQR5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lime1Q9EQR5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lime1Q9EQR5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Lime1Q9EQR5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lime1Q9EQR5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lime1Q9EQR5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lime1Q9EQR5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lime1Q9EQR5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.95■□□□□ 0.95
Lime1Q9EQR5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lime1Q9EQR5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Lime1Q9EQR5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lime1Q9EQR5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lime1Q9EQR5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lime1Q9EQR5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Lime1Q9EQR5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lime1Q9EQR5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lime1Q9EQR5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Lime1Q9EQR5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lime1Q9EQR5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lime1Q9EQR5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lime1Q9EQR5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lime1Q9EQR5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lime1Q9EQR5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lime1Q9EQR5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lime1Q9EQR5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lime1Q9EQR5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lime1Q9EQR5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lime1Q9EQR5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lime1Q9EQR5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lime1Q9EQR5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lime1Q9EQR5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lime1Q9EQR5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lime1Q9EQR5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lime1Q9EQR5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lime1Q9EQR5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lime1Q9EQR5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Lime1Q9EQR5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lime1Q9EQR5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lime1Q9EQR5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lime1Q9EQR5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lime1Q9EQR5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lime1Q9EQR5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lime1Q9EQR5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lime1Q9EQR5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lime1Q9EQR5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lime1Q9EQR5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.83■□□□□ 0.93
Lime1Q9EQR5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.83■□□□□ 0.93
Lime1Q9EQR5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.83■□□□□ 0.93
Lime1Q9EQR5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lime1Q9EQR5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Lime1Q9EQR5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lime1Q9EQR5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lime1Q9EQR5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lime1Q9EQR5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Lime1Q9EQR5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lime1Q9EQR5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lime1Q9EQR5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.8■□□□□ 0.92
Lime1Q9EQR5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lime1Q9EQR5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lime1Q9EQR5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lime1Q9EQR5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lime1Q9EQR5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Lime1Q9EQR5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Lime1Q9EQR5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lime1Q9EQR5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lime1Q9EQR5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Lime1Q9EQR5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lime1Q9EQR5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lime1Q9EQR5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lime1Q9EQR5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.77■□□□□ 0.92
Lime1Q9EQR5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lime1Q9EQR5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lime1Q9EQR5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lime1Q9EQR5 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.76■□□□□ 0.91
Lime1Q9EQR5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lime1Q9EQR5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lime1Q9EQR5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.75■□□□□ 0.91
Lime1Q9EQR5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lime1Q9EQR5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lime1Q9EQR5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lime1Q9EQR5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.74■□□□□ 0.91
Lime1Q9EQR5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lime1Q9EQR5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lime1Q9EQR5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.73■□□□□ 0.91
Lime1Q9EQR5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lime1Q9EQR5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lime1Q9EQR5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lime1Q9EQR5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lime1Q9EQR5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Lime1Q9EQR5 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.71■□□□□ 0.91
Lime1Q9EQR5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lime1Q9EQR5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lime1Q9EQR5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lime1Q9EQR5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Lime1Q9EQR5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.7■□□□□ 0.9
Lime1Q9EQR5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lime1Q9EQR5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.7■□□□□ 0.9
Lime1Q9EQR5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms