Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mbd3l1Q9D9H3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Mbd3l1Q9D9H3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mbd3l1Q9D9H3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mbd3l1Q9D9H3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mbd3l1Q9D9H3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mbd3l1Q9D9H3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mbd3l1Q9D9H3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mbd3l1Q9D9H3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mbd3l1Q9D9H3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.74■□□□□ 0.91
Mbd3l1Q9D9H3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mbd3l1Q9D9H3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mbd3l1Q9D9H3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mbd3l1Q9D9H3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mbd3l1Q9D9H3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mbd3l1Q9D9H3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mbd3l1Q9D9H3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mbd3l1Q9D9H3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mbd3l1Q9D9H3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mbd3l1Q9D9H3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mbd3l1Q9D9H3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Mbd3l1Q9D9H3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.72■□□□□ 0.91
Mbd3l1Q9D9H3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mbd3l1Q9D9H3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mbd3l1Q9D9H3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mbd3l1Q9D9H3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mbd3l1Q9D9H3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mbd3l1Q9D9H3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mbd3l1Q9D9H3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Mbd3l1Q9D9H3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3l1Q9D9H3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3l1Q9D9H3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mbd3l1Q9D9H3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3l1Q9D9H3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mbd3l1Q9D9H3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
Mbd3l1Q9D9H3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3l1Q9D9H3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mbd3l1Q9D9H3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Mbd3l1Q9D9H3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3l1Q9D9H3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Mbd3l1Q9D9H3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mbd3l1Q9D9H3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.66■□□□□ 0.9
Mbd3l1Q9D9H3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mbd3l1Q9D9H3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.66■□□□□ 0.9
Mbd3l1Q9D9H3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mbd3l1Q9D9H3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.65■□□□□ 0.9
Mbd3l1Q9D9H3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3l1Q9D9H3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3l1Q9D9H3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mbd3l1Q9D9H3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Mbd3l1Q9D9H3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mbd3l1Q9D9H3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mbd3l1Q9D9H3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mbd3l1Q9D9H3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mbd3l1Q9D9H3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mbd3l1Q9D9H3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mbd3l1Q9D9H3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Mbd3l1Q9D9H3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mbd3l1Q9D9H3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mbd3l1Q9D9H3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mbd3l1Q9D9H3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mbd3l1Q9D9H3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mbd3l1Q9D9H3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Mbd3l1Q9D9H3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mbd3l1Q9D9H3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mbd3l1Q9D9H3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mbd3l1Q9D9H3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mbd3l1Q9D9H3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mbd3l1Q9D9H3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mbd3l1Q9D9H3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mbd3l1Q9D9H3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Mbd3l1Q9D9H3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Mbd3l1Q9D9H3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mbd3l1Q9D9H3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mbd3l1Q9D9H3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.56■□□□□ 0.88
Mbd3l1Q9D9H3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Mbd3l1Q9D9H3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mbd3l1Q9D9H3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.54■□□□□ 0.88
Mbd3l1Q9D9H3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Mbd3l1Q9D9H3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mbd3l1Q9D9H3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mbd3l1Q9D9H3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mbd3l1Q9D9H3 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.53■□□□□ 0.88
Mbd3l1Q9D9H3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mbd3l1Q9D9H3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mbd3l1Q9D9H3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mbd3l1Q9D9H3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.52■□□□□ 0.88
Mbd3l1Q9D9H3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mbd3l1Q9D9H3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mbd3l1Q9D9H3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mbd3l1Q9D9H3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.52■□□□□ 0.87
Mbd3l1Q9D9H3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Mbd3l1Q9D9H3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Mbd3l1Q9D9H3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mbd3l1Q9D9H3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Mbd3l1Q9D9H3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mbd3l1Q9D9H3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.5■□□□□ 0.87
Mbd3l1Q9D9H3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mbd3l1Q9D9H3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mbd3l1Q9D9H3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms