Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Tmem54Q9D7S1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.09■□□□□ 0.97
Tmem54Q9D7S1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tmem54Q9D7S1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Tmem54Q9D7S1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tmem54Q9D7S1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tmem54Q9D7S1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.06■□□□□ 0.96
Tmem54Q9D7S1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tmem54Q9D7S1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tmem54Q9D7S1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tmem54Q9D7S1 Gm6821-201ENSMUST00000107540 542 ntBASIC21.05■□□□□ 0.96
Tmem54Q9D7S1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Tmem54Q9D7S1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.05■□□□□ 0.96
Tmem54Q9D7S1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tmem54Q9D7S1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Tmem54Q9D7S1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tmem54Q9D7S1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tmem54Q9D7S1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tmem54Q9D7S1 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.03■□□□□ 0.96
Tmem54Q9D7S1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tmem54Q9D7S1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tmem54Q9D7S1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Tmem54Q9D7S1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tmem54Q9D7S1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21■□□□□ 0.95
Tmem54Q9D7S1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tmem54Q9D7S1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tmem54Q9D7S1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tmem54Q9D7S1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tmem54Q9D7S1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tmem54Q9D7S1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tmem54Q9D7S1 Gm8503-201ENSMUST00000118131 455 ntBASIC20.99■□□□□ 0.95
Tmem54Q9D7S1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tmem54Q9D7S1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tmem54Q9D7S1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tmem54Q9D7S1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tmem54Q9D7S1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tmem54Q9D7S1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tmem54Q9D7S1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.97■□□□□ 0.95
Tmem54Q9D7S1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Tmem54Q9D7S1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tmem54Q9D7S1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tmem54Q9D7S1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem54Q9D7S1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem54Q9D7S1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem54Q9D7S1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem54Q9D7S1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem54Q9D7S1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.94■□□□□ 0.94
Tmem54Q9D7S1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tmem54Q9D7S1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tmem54Q9D7S1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tmem54Q9D7S1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.93■□□□□ 0.94
Tmem54Q9D7S1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.92■□□□□ 0.94
Tmem54Q9D7S1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.92■□□□□ 0.94
Tmem54Q9D7S1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Tmem54Q9D7S1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Tmem54Q9D7S1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.91■□□□□ 0.94
Tmem54Q9D7S1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tmem54Q9D7S1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tmem54Q9D7S1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem54Q9D7S1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem54Q9D7S1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem54Q9D7S1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem54Q9D7S1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem54Q9D7S1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem54Q9D7S1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tmem54Q9D7S1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem54Q9D7S1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tmem54Q9D7S1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem54Q9D7S1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem54Q9D7S1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.89■□□□□ 0.93
Tmem54Q9D7S1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmem54Q9D7S1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmem54Q9D7S1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.88■□□□□ 0.93
Tmem54Q9D7S1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.87■□□□□ 0.93
Tmem54Q9D7S1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Tmem54Q9D7S1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.86■□□□□ 0.93
Tmem54Q9D7S1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tmem54Q9D7S1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tmem54Q9D7S1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tmem54Q9D7S1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.84■□□□□ 0.93
Tmem54Q9D7S1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.83■□□□□ 0.93
Tmem54Q9D7S1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tmem54Q9D7S1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.82■□□□□ 0.92
Tmem54Q9D7S1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.82■□□□□ 0.92
Tmem54Q9D7S1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tmem54Q9D7S1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tmem54Q9D7S1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.81■□□□□ 0.92
Tmem54Q9D7S1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tmem54Q9D7S1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tmem54Q9D7S1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tmem54Q9D7S1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.8■□□□□ 0.92
Tmem54Q9D7S1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tmem54Q9D7S1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tmem54Q9D7S1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem54Q9D7S1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem54Q9D7S1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem54Q9D7S1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tmem54Q9D7S1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem54Q9D7S1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem54Q9D7S1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms