Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShpkQ9D5J6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ShpkQ9D5J6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ShpkQ9D5J6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ShpkQ9D5J6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShpkQ9D5J6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ShpkQ9D5J6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ShpkQ9D5J6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShpkQ9D5J6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShpkQ9D5J6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.93■□□□□ 0.78
ShpkQ9D5J6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ShpkQ9D5J6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ShpkQ9D5J6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShpkQ9D5J6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ShpkQ9D5J6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.91■□□□□ 0.78
ShpkQ9D5J6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShpkQ9D5J6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShpkQ9D5J6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.91■□□□□ 0.78
ShpkQ9D5J6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShpkQ9D5J6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShpkQ9D5J6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ShpkQ9D5J6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShpkQ9D5J6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShpkQ9D5J6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShpkQ9D5J6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
ShpkQ9D5J6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShpkQ9D5J6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ShpkQ9D5J6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShpkQ9D5J6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ShpkQ9D5J6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ShpkQ9D5J6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
ShpkQ9D5J6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
ShpkQ9D5J6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShpkQ9D5J6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShpkQ9D5J6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShpkQ9D5J6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShpkQ9D5J6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShpkQ9D5J6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ShpkQ9D5J6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ShpkQ9D5J6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
ShpkQ9D5J6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ShpkQ9D5J6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ShpkQ9D5J6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ShpkQ9D5J6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShpkQ9D5J6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShpkQ9D5J6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ShpkQ9D5J6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ShpkQ9D5J6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ShpkQ9D5J6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ShpkQ9D5J6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShpkQ9D5J6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ShpkQ9D5J6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShpkQ9D5J6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ShpkQ9D5J6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
ShpkQ9D5J6 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.8■□□□□ 0.76
ShpkQ9D5J6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ShpkQ9D5J6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShpkQ9D5J6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShpkQ9D5J6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ShpkQ9D5J6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShpkQ9D5J6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShpkQ9D5J6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShpkQ9D5J6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShpkQ9D5J6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.77■□□□□ 0.76
ShpkQ9D5J6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ShpkQ9D5J6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.77■□□□□ 0.75
ShpkQ9D5J6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShpkQ9D5J6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShpkQ9D5J6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.76■□□□□ 0.75
ShpkQ9D5J6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.75■□□□□ 0.75
ShpkQ9D5J6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ShpkQ9D5J6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ShpkQ9D5J6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.74■□□□□ 0.75
ShpkQ9D5J6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ShpkQ9D5J6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShpkQ9D5J6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShpkQ9D5J6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShpkQ9D5J6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShpkQ9D5J6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShpkQ9D5J6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShpkQ9D5J6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShpkQ9D5J6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShpkQ9D5J6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ShpkQ9D5J6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShpkQ9D5J6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ShpkQ9D5J6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShpkQ9D5J6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShpkQ9D5J6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShpkQ9D5J6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShpkQ9D5J6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ShpkQ9D5J6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShpkQ9D5J6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShpkQ9D5J6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ShpkQ9D5J6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShpkQ9D5J6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ShpkQ9D5J6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShpkQ9D5J6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShpkQ9D5J6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ShpkQ9D5J6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ShpkQ9D5J6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms