Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retreg3Q9CQV4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retreg3Q9CQV4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retreg3Q9CQV4 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.22■■□□□ 1.47
Retreg3Q9CQV4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retreg3Q9CQV4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retreg3Q9CQV4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retreg3Q9CQV4 Gm8503-201ENSMUST00000118131 455 ntBASIC24.21■■□□□ 1.47
Retreg3Q9CQV4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retreg3Q9CQV4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Retreg3Q9CQV4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Retreg3Q9CQV4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.2■■□□□ 1.46
Retreg3Q9CQV4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Retreg3Q9CQV4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retreg3Q9CQV4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retreg3Q9CQV4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retreg3Q9CQV4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.17■■□□□ 1.46
Retreg3Q9CQV4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retreg3Q9CQV4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.16■■□□□ 1.46
Retreg3Q9CQV4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retreg3Q9CQV4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retreg3Q9CQV4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Retreg3Q9CQV4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Retreg3Q9CQV4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retreg3Q9CQV4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Retreg3Q9CQV4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retreg3Q9CQV4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retreg3Q9CQV4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retreg3Q9CQV4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retreg3Q9CQV4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retreg3Q9CQV4 Gm30023-201ENSMUST00000197970 889 ntBASIC24.11■■□□□ 1.45
Retreg3Q9CQV4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.11■■□□□ 1.45
Retreg3Q9CQV4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Retreg3Q9CQV4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.1■■□□□ 1.45
Retreg3Q9CQV4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Retreg3Q9CQV4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retreg3Q9CQV4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retreg3Q9CQV4 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.09■■□□□ 1.45
Retreg3Q9CQV4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retreg3Q9CQV4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retreg3Q9CQV4 Gm6821-201ENSMUST00000107540 542 ntBASIC24.07■■□□□ 1.44
Retreg3Q9CQV4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retreg3Q9CQV4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retreg3Q9CQV4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Retreg3Q9CQV4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Retreg3Q9CQV4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retreg3Q9CQV4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retreg3Q9CQV4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.05■■□□□ 1.44
Retreg3Q9CQV4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.05■■□□□ 1.44
Retreg3Q9CQV4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Retreg3Q9CQV4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.05■■□□□ 1.44
Retreg3Q9CQV4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Retreg3Q9CQV4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retreg3Q9CQV4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.04■■□□□ 1.44
Retreg3Q9CQV4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
Retreg3Q9CQV4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Retreg3Q9CQV4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Retreg3Q9CQV4 Nkain2-201ENSMUST00000092602 558 ntBASIC24.02■■□□□ 1.44
Retreg3Q9CQV4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retreg3Q9CQV4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Retreg3Q9CQV4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24■■□□□ 1.43
Retreg3Q9CQV4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24■■□□□ 1.43
Retreg3Q9CQV4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Retreg3Q9CQV4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retreg3Q9CQV4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retreg3Q9CQV4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg3Q9CQV4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg3Q9CQV4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg3Q9CQV4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg3Q9CQV4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg3Q9CQV4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retreg3Q9CQV4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retreg3Q9CQV4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
Retreg3Q9CQV4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.96■■□□□ 1.43
Retreg3Q9CQV4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retreg3Q9CQV4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retreg3Q9CQV4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retreg3Q9CQV4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.96■■□□□ 1.43
Retreg3Q9CQV4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retreg3Q9CQV4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.43
Retreg3Q9CQV4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retreg3Q9CQV4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Retreg3Q9CQV4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retreg3Q9CQV4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retreg3Q9CQV4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Retreg3Q9CQV4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retreg3Q9CQV4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Retreg3Q9CQV4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Retreg3Q9CQV4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retreg3Q9CQV4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.91■■□□□ 1.42
Retreg3Q9CQV4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Retreg3Q9CQV4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.91■■□□□ 1.42
Retreg3Q9CQV4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Retreg3Q9CQV4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retreg3Q9CQV4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Retreg3Q9CQV4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Retreg3Q9CQV4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Retreg3Q9CQV4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.88■■□□□ 1.41
Retreg3Q9CQV4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retreg3Q9CQV4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms