Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.86□□□□□ -0.35
Sec61bQ9CQS8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61bQ9CQS8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61bQ9CQS8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC12.85□□□□□ -0.35
Sec61bQ9CQS8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC12.85□□□□□ -0.35
Sec61bQ9CQS8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sec61bQ9CQS8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61bQ9CQS8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61bQ9CQS8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61bQ9CQS8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC12.84□□□□□ -0.35
Sec61bQ9CQS8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61bQ9CQS8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61bQ9CQS8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61bQ9CQS8 Particl-201ENSMUST00000205370 1560 ntBASIC12.83□□□□□ -0.36
Sec61bQ9CQS8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Mir6538-201ENSMUST00000183713 110 ntBASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61bQ9CQS8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61bQ9CQS8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61bQ9CQS8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61bQ9CQS8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61bQ9CQS8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61bQ9CQS8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sec61bQ9CQS8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Sec61bQ9CQS8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC12.79□□□□□ -0.36
Sec61bQ9CQS8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61bQ9CQS8 Gm6311-201ENSMUST00000073790 878 ntBASIC12.79□□□□□ -0.36
Sec61bQ9CQS8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61bQ9CQS8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61bQ9CQS8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61bQ9CQS8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sec61bQ9CQS8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Sec61bQ9CQS8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61bQ9CQS8 Pcf11-205ENSMUST00000208255 1720 ntBASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61bQ9CQS8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61bQ9CQS8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC12.75□□□□□ -0.37
Sec61bQ9CQS8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61bQ9CQS8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61bQ9CQS8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61bQ9CQS8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61bQ9CQS8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61bQ9CQS8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61bQ9CQS8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sec61bQ9CQS8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sec61bQ9CQS8 Gm30023-201ENSMUST00000197970 889 ntBASIC12.73□□□□□ -0.37
Sec61bQ9CQS8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sec61bQ9CQS8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61bQ9CQS8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61bQ9CQS8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61bQ9CQS8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61bQ9CQS8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61bQ9CQS8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61bQ9CQS8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sec61bQ9CQS8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sec61bQ9CQS8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sec61bQ9CQS8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sec61bQ9CQS8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sec61bQ9CQS8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sec61bQ9CQS8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sec61bQ9CQS8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sec61bQ9CQS8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sec61bQ9CQS8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC12.7□□□□□ -0.38
Sec61bQ9CQS8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sec61bQ9CQS8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sec61bQ9CQS8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sec61bQ9CQS8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sec61bQ9CQS8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61bQ9CQS8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61bQ9CQS8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61bQ9CQS8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61bQ9CQS8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sec61bQ9CQS8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC12.68□□□□□ -0.38
Sec61bQ9CQS8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61bQ9CQS8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61bQ9CQS8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61bQ9CQS8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC12.68□□□□□ -0.38
Sec61bQ9CQS8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61bQ9CQS8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sec61bQ9CQS8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC12.67□□□□□ -0.38
Sec61bQ9CQS8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61bQ9CQS8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC12.66□□□□□ -0.38
Sec61bQ9CQS8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61bQ9CQS8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms