Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb20Q91XZ9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Pcdhb20Q91XZ9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Pcdhb20Q91XZ9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb20Q91XZ9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Pcdhb20Q91XZ9 Gm30023-201ENSMUST00000197970 889 ntBASIC23.04■■□□□ 1.28
Pcdhb20Q91XZ9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb20Q91XZ9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb20Q91XZ9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb20Q91XZ9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb20Q91XZ9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb20Q91XZ9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb20Q91XZ9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb20Q91XZ9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.03■■□□□ 1.28
Pcdhb20Q91XZ9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb20Q91XZ9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb20Q91XZ9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Pcdhb20Q91XZ9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.01■■□□□ 1.27
Pcdhb20Q91XZ9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb20Q91XZ9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23■■□□□ 1.27
Pcdhb20Q91XZ9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23■■□□□ 1.27
Pcdhb20Q91XZ9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb20Q91XZ9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb20Q91XZ9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb20Q91XZ9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb20Q91XZ9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.99■■□□□ 1.27
Pcdhb20Q91XZ9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb20Q91XZ9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
Pcdhb20Q91XZ9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb20Q91XZ9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.97■■□□□ 1.27
Pcdhb20Q91XZ9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhb20Q91XZ9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb20Q91XZ9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Pcdhb20Q91XZ9 Gm7432-201ENSMUST00000210343 879 ntBASIC22.96■■□□□ 1.27
Pcdhb20Q91XZ9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb20Q91XZ9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb20Q91XZ9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb20Q91XZ9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb20Q91XZ9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Pcdhb20Q91XZ9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb20Q91XZ9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb20Q91XZ9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb20Q91XZ9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb20Q91XZ9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Pcdhb20Q91XZ9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Pcdhb20Q91XZ9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb20Q91XZ9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb20Q91XZ9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb20Q91XZ9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.9■■□□□ 1.26
Pcdhb20Q91XZ9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb20Q91XZ9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb20Q91XZ9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhb20Q91XZ9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.89■■□□□ 1.25
Pcdhb20Q91XZ9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.88■■□□□ 1.25
Pcdhb20Q91XZ9 Gm44487-201ENSMUST00000205145 325 ntBASIC22.88■■□□□ 1.25
Pcdhb20Q91XZ9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb20Q91XZ9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb20Q91XZ9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb20Q91XZ9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb20Q91XZ9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb20Q91XZ9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb20Q91XZ9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.84■■□□□ 1.25
Pcdhb20Q91XZ9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.84■■□□□ 1.25
Pcdhb20Q91XZ9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.84■■□□□ 1.25
Pcdhb20Q91XZ9 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.83■■□□□ 1.25
Pcdhb20Q91XZ9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pcdhb20Q91XZ9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
Pcdhb20Q91XZ9 Gm11599-201ENSMUST00000118720 878 ntBASIC22.82■■□□□ 1.24
Pcdhb20Q91XZ9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb20Q91XZ9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb20Q91XZ9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb20Q91XZ9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.81■■□□□ 1.24
Pcdhb20Q91XZ9 Amer2-203ENSMUST00000225247 2662 ntBASIC22.81■■□□□ 1.24
Pcdhb20Q91XZ9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
Pcdhb20Q91XZ9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb20Q91XZ9 Particl-201ENSMUST00000205370 1560 ntBASIC22.8■■□□□ 1.24
Pcdhb20Q91XZ9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhb20Q91XZ9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb20Q91XZ9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhb20Q91XZ9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.78■■□□□ 1.24
Pcdhb20Q91XZ9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb20Q91XZ9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Pcdhb20Q91XZ9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Pcdhb20Q91XZ9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb20Q91XZ9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Pcdhb20Q91XZ9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.76■■□□□ 1.23
Pcdhb20Q91XZ9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb20Q91XZ9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb20Q91XZ9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pcdhb20Q91XZ9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb20Q91XZ9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb20Q91XZ9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb20Q91XZ9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
Pcdhb20Q91XZ9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb20Q91XZ9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhb20Q91XZ9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.74■■□□□ 1.23
Pcdhb20Q91XZ9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhb20Q91XZ9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.74■■□□□ 1.23
Pcdhb20Q91XZ9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb20Q91XZ9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms