Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H1fooQ8VIK3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.91■□□□□ 0.78
H1fooQ8VIK3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
H1fooQ8VIK3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H1fooQ8VIK3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H1fooQ8VIK3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H1fooQ8VIK3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H1fooQ8VIK3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H1fooQ8VIK3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
H1fooQ8VIK3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H1fooQ8VIK3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H1fooQ8VIK3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
H1fooQ8VIK3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
H1fooQ8VIK3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H1fooQ8VIK3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
H1fooQ8VIK3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
H1fooQ8VIK3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H1fooQ8VIK3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.86■□□□□ 0.77
H1fooQ8VIK3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
H1fooQ8VIK3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H1fooQ8VIK3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H1fooQ8VIK3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
H1fooQ8VIK3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H1fooQ8VIK3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H1fooQ8VIK3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
H1fooQ8VIK3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
H1fooQ8VIK3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
H1fooQ8VIK3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
H1fooQ8VIK3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H1fooQ8VIK3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H1fooQ8VIK3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H1fooQ8VIK3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
H1fooQ8VIK3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H1fooQ8VIK3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
H1fooQ8VIK3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H1fooQ8VIK3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H1fooQ8VIK3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
H1fooQ8VIK3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H1fooQ8VIK3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
H1fooQ8VIK3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H1fooQ8VIK3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
H1fooQ8VIK3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
H1fooQ8VIK3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H1fooQ8VIK3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H1fooQ8VIK3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H1fooQ8VIK3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
H1fooQ8VIK3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H1fooQ8VIK3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
H1fooQ8VIK3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H1fooQ8VIK3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
H1fooQ8VIK3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
H1fooQ8VIK3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H1fooQ8VIK3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H1fooQ8VIK3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H1fooQ8VIK3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.76■□□□□ 0.75
H1fooQ8VIK3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.76■□□□□ 0.75
H1fooQ8VIK3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.76■□□□□ 0.75
H1fooQ8VIK3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
H1fooQ8VIK3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
H1fooQ8VIK3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H1fooQ8VIK3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H1fooQ8VIK3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H1fooQ8VIK3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.73■□□□□ 0.75
H1fooQ8VIK3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H1fooQ8VIK3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
H1fooQ8VIK3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
H1fooQ8VIK3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
H1fooQ8VIK3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H1fooQ8VIK3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
H1fooQ8VIK3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
H1fooQ8VIK3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.71■□□□□ 0.75
H1fooQ8VIK3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
H1fooQ8VIK3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H1fooQ8VIK3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H1fooQ8VIK3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H1fooQ8VIK3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H1fooQ8VIK3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
H1fooQ8VIK3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
H1fooQ8VIK3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.7■□□□□ 0.74
H1fooQ8VIK3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.69■□□□□ 0.74
H1fooQ8VIK3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H1fooQ8VIK3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H1fooQ8VIK3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H1fooQ8VIK3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H1fooQ8VIK3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
H1fooQ8VIK3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H1fooQ8VIK3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
H1fooQ8VIK3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.67■□□□□ 0.74
H1fooQ8VIK3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H1fooQ8VIK3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
H1fooQ8VIK3 Gm30023-201ENSMUST00000197970 889 ntBASIC19.66■□□□□ 0.74
H1fooQ8VIK3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
H1fooQ8VIK3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H1fooQ8VIK3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.65■□□□□ 0.74
H1fooQ8VIK3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H1fooQ8VIK3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H1fooQ8VIK3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
H1fooQ8VIK3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
H1fooQ8VIK3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H1fooQ8VIK3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms