Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab40cQ8VHQ4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab40cQ8VHQ4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab40cQ8VHQ4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab40cQ8VHQ4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rab40cQ8VHQ4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab40cQ8VHQ4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.39■□□□□ 0.69
Rab40cQ8VHQ4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab40cQ8VHQ4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab40cQ8VHQ4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab40cQ8VHQ4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab40cQ8VHQ4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab40cQ8VHQ4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rab40cQ8VHQ4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab40cQ8VHQ4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab40cQ8VHQ4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab40cQ8VHQ4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab40cQ8VHQ4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab40cQ8VHQ4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab40cQ8VHQ4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab40cQ8VHQ4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40cQ8VHQ4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40cQ8VHQ4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40cQ8VHQ4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40cQ8VHQ4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40cQ8VHQ4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40cQ8VHQ4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab40cQ8VHQ4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rab40cQ8VHQ4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rab40cQ8VHQ4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Rab40cQ8VHQ4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab40cQ8VHQ4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab40cQ8VHQ4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab40cQ8VHQ4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.33■□□□□ 0.68
Rab40cQ8VHQ4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rab40cQ8VHQ4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.32■□□□□ 0.68
Rab40cQ8VHQ4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab40cQ8VHQ4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab40cQ8VHQ4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40cQ8VHQ4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40cQ8VHQ4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40cQ8VHQ4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.31■□□□□ 0.68
Rab40cQ8VHQ4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab40cQ8VHQ4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab40cQ8VHQ4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab40cQ8VHQ4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40cQ8VHQ4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40cQ8VHQ4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rab40cQ8VHQ4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40cQ8VHQ4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40cQ8VHQ4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.28■□□□□ 0.68
Rab40cQ8VHQ4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab40cQ8VHQ4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab40cQ8VHQ4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab40cQ8VHQ4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab40cQ8VHQ4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab40cQ8VHQ4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rab40cQ8VHQ4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.27■□□□□ 0.68
Rab40cQ8VHQ4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rab40cQ8VHQ4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.27■□□□□ 0.67
Rab40cQ8VHQ4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab40cQ8VHQ4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab40cQ8VHQ4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab40cQ8VHQ4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rab40cQ8VHQ4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab40cQ8VHQ4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab40cQ8VHQ4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.25■□□□□ 0.67
Rab40cQ8VHQ4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab40cQ8VHQ4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40cQ8VHQ4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40cQ8VHQ4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40cQ8VHQ4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40cQ8VHQ4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab40cQ8VHQ4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab40cQ8VHQ4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab40cQ8VHQ4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab40cQ8VHQ4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rab40cQ8VHQ4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rab40cQ8VHQ4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rab40cQ8VHQ4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40cQ8VHQ4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab40cQ8VHQ4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Rab40cQ8VHQ4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab40cQ8VHQ4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rab40cQ8VHQ4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab40cQ8VHQ4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rab40cQ8VHQ4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab40cQ8VHQ4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab40cQ8VHQ4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab40cQ8VHQ4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab40cQ8VHQ4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rab40cQ8VHQ4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab40cQ8VHQ4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rab40cQ8VHQ4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab40cQ8VHQ4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab40cQ8VHQ4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab40cQ8VHQ4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab40cQ8VHQ4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab40cQ8VHQ4 Gm24804-201ENSMUST00000174982 85 ntBASIC19.17■□□□□ 0.66
Rab40cQ8VHQ4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms