Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rcc1Q8VE37 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rcc1Q8VE37 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rcc1Q8VE37 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rcc1Q8VE37 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.48■□□□□ 0.87
Rcc1Q8VE37 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.48■□□□□ 0.87
Rcc1Q8VE37 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.48■□□□□ 0.87
Rcc1Q8VE37 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Rcc1Q8VE37 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rcc1Q8VE37 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rcc1Q8VE37 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rcc1Q8VE37 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rcc1Q8VE37 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Rcc1Q8VE37 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rcc1Q8VE37 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rcc1Q8VE37 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rcc1Q8VE37 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rcc1Q8VE37 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.44■□□□□ 0.86
Rcc1Q8VE37 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rcc1Q8VE37 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.43■□□□□ 0.86
Rcc1Q8VE37 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Rcc1Q8VE37 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rcc1Q8VE37 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.42■□□□□ 0.86
Rcc1Q8VE37 Gm9397-201ENSMUST00000200125 605 ntBASIC20.41■□□□□ 0.86
Rcc1Q8VE37 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.41■□□□□ 0.86
Rcc1Q8VE37 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rcc1Q8VE37 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.4■□□□□ 0.86
Rcc1Q8VE37 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rcc1Q8VE37 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.39■□□□□ 0.85
Rcc1Q8VE37 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.39■□□□□ 0.85
Rcc1Q8VE37 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rcc1Q8VE37 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rcc1Q8VE37 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rcc1Q8VE37 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rcc1Q8VE37 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rcc1Q8VE37 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rcc1Q8VE37 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rcc1Q8VE37 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.37■□□□□ 0.85
Rcc1Q8VE37 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rcc1Q8VE37 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rcc1Q8VE37 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rcc1Q8VE37 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rcc1Q8VE37 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rcc1Q8VE37 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rcc1Q8VE37 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rcc1Q8VE37 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rcc1Q8VE37 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rcc1Q8VE37 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rcc1Q8VE37 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.34■□□□□ 0.85
Rcc1Q8VE37 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.34■□□□□ 0.85
Rcc1Q8VE37 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rcc1Q8VE37 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rcc1Q8VE37 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rcc1Q8VE37 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rcc1Q8VE37 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rcc1Q8VE37 Gm24970-201ENSMUST00000175582 82 ntBASIC20.33■□□□□ 0.85
Rcc1Q8VE37 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rcc1Q8VE37 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rcc1Q8VE37 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rcc1Q8VE37 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rcc1Q8VE37 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rcc1Q8VE37 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rcc1Q8VE37 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.32■□□□□ 0.84
Rcc1Q8VE37 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rcc1Q8VE37 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Rcc1Q8VE37 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rcc1Q8VE37 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rcc1Q8VE37 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rcc1Q8VE37 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rcc1Q8VE37 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rcc1Q8VE37 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rcc1Q8VE37 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rcc1Q8VE37 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.29■□□□□ 0.84
Rcc1Q8VE37 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rcc1Q8VE37 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rcc1Q8VE37 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.28■□□□□ 0.84
Rcc1Q8VE37 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.28■□□□□ 0.84
Rcc1Q8VE37 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.28■□□□□ 0.84
Rcc1Q8VE37 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rcc1Q8VE37 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rcc1Q8VE37 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rcc1Q8VE37 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.27■□□□□ 0.84
Rcc1Q8VE37 Gm45855-201ENSMUST00000212546 880 ntBASIC20.27■□□□□ 0.84
Rcc1Q8VE37 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rcc1Q8VE37 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rcc1Q8VE37 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rcc1Q8VE37 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rcc1Q8VE37 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rcc1Q8VE37 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rcc1Q8VE37 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rcc1Q8VE37 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rcc1Q8VE37 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rcc1Q8VE37 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rcc1Q8VE37 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rcc1Q8VE37 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rcc1Q8VE37 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rcc1Q8VE37 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.22■□□□□ 0.83
Rcc1Q8VE37 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Rcc1Q8VE37 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rcc1Q8VE37 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms