Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ddx39aQ8VDW0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx39aQ8VDW0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
Ddx39aQ8VDW0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ddx39aQ8VDW0 Zxda-201ENSMUST00000117281 2621 ntBASIC26.88■■□□□ 1.89
Ddx39aQ8VDW0 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.88■■□□□ 1.89
Ddx39aQ8VDW0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx39aQ8VDW0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx39aQ8VDW0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx39aQ8VDW0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx39aQ8VDW0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx39aQ8VDW0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Ddx39aQ8VDW0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx39aQ8VDW0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx39aQ8VDW0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx39aQ8VDW0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx39aQ8VDW0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx39aQ8VDW0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.79■■□□□ 1.88
Ddx39aQ8VDW0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx39aQ8VDW0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ddx39aQ8VDW0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx39aQ8VDW0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx39aQ8VDW0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx39aQ8VDW0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.74■■□□□ 1.87
Ddx39aQ8VDW0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Ddx39aQ8VDW0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx39aQ8VDW0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Ddx39aQ8VDW0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx39aQ8VDW0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx39aQ8VDW0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx39aQ8VDW0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.67■■□□□ 1.86
Ddx39aQ8VDW0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.67■■□□□ 1.86
Ddx39aQ8VDW0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.67■■□□□ 1.86
Ddx39aQ8VDW0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx39aQ8VDW0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.66■■□□□ 1.86
Ddx39aQ8VDW0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx39aQ8VDW0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx39aQ8VDW0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx39aQ8VDW0 Particl-201ENSMUST00000205370 1560 ntBASIC26.65■■□□□ 1.86
Ddx39aQ8VDW0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.64■■□□□ 1.86
Ddx39aQ8VDW0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx39aQ8VDW0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx39aQ8VDW0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
Ddx39aQ8VDW0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx39aQ8VDW0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.61■■□□□ 1.85
Ddx39aQ8VDW0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Ddx39aQ8VDW0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.61■■□□□ 1.85
Ddx39aQ8VDW0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ddx39aQ8VDW0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ddx39aQ8VDW0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ddx39aQ8VDW0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.6■■□□□ 1.85
Ddx39aQ8VDW0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Ddx39aQ8VDW0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx39aQ8VDW0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx39aQ8VDW0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx39aQ8VDW0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx39aQ8VDW0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.58■■□□□ 1.85
Ddx39aQ8VDW0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx39aQ8VDW0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx39aQ8VDW0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Ddx39aQ8VDW0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx39aQ8VDW0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx39aQ8VDW0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx39aQ8VDW0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ddx39aQ8VDW0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
Ddx39aQ8VDW0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx39aQ8VDW0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx39aQ8VDW0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 Gm6311-201ENSMUST00000073790 878 ntBASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx39aQ8VDW0 Gm11175-201ENSMUST00000116172 543 ntBASIC26.45■■□□□ 1.82
Ddx39aQ8VDW0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.44■■□□□ 1.82
Ddx39aQ8VDW0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms