Protein–RNA interactions for Protein: Q8R2E3

Vmn1r36, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r36Q8R2E3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20■□□□□ 0.79
Vmn1r36Q8R2E3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r36Q8R2E3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r36Q8R2E3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r36Q8R2E3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Vmn1r36Q8R2E3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r36Q8R2E3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vmn1r36Q8R2E3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Vmn1r36Q8R2E3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vmn1r36Q8R2E3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.96■□□□□ 0.79
Vmn1r36Q8R2E3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Vmn1r36Q8R2E3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vmn1r36Q8R2E3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vmn1r36Q8R2E3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Vmn1r36Q8R2E3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vmn1r36Q8R2E3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.94■□□□□ 0.78
Vmn1r36Q8R2E3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vmn1r36Q8R2E3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vmn1r36Q8R2E3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vmn1r36Q8R2E3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vmn1r36Q8R2E3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vmn1r36Q8R2E3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.92■□□□□ 0.78
Vmn1r36Q8R2E3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vmn1r36Q8R2E3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Vmn1r36Q8R2E3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vmn1r36Q8R2E3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vmn1r36Q8R2E3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vmn1r36Q8R2E3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vmn1r36Q8R2E3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vmn1r36Q8R2E3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vmn1r36Q8R2E3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vmn1r36Q8R2E3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vmn1r36Q8R2E3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.88■□□□□ 0.77
Vmn1r36Q8R2E3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vmn1r36Q8R2E3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vmn1r36Q8R2E3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vmn1r36Q8R2E3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Vmn1r36Q8R2E3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vmn1r36Q8R2E3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vmn1r36Q8R2E3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vmn1r36Q8R2E3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vmn1r36Q8R2E3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vmn1r36Q8R2E3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vmn1r36Q8R2E3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vmn1r36Q8R2E3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vmn1r36Q8R2E3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vmn1r36Q8R2E3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vmn1r36Q8R2E3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vmn1r36Q8R2E3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vmn1r36Q8R2E3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vmn1r36Q8R2E3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vmn1r36Q8R2E3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vmn1r36Q8R2E3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vmn1r36Q8R2E3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vmn1r36Q8R2E3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vmn1r36Q8R2E3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r36Q8R2E3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r36Q8R2E3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.8■□□□□ 0.76
Vmn1r36Q8R2E3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Vmn1r36Q8R2E3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r36Q8R2E3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vmn1r36Q8R2E3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmn1r36Q8R2E3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r36Q8R2E3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r36Q8R2E3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r36Q8R2E3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r36Q8R2E3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.79■□□□□ 0.76
Vmn1r36Q8R2E3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r36Q8R2E3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmn1r36Q8R2E3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmn1r36Q8R2E3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vmn1r36Q8R2E3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vmn1r36Q8R2E3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vmn1r36Q8R2E3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vmn1r36Q8R2E3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vmn1r36Q8R2E3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Vmn1r36Q8R2E3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vmn1r36Q8R2E3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Vmn1r36Q8R2E3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmn1r36Q8R2E3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vmn1r36Q8R2E3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r36Q8R2E3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r36Q8R2E3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vmn1r36Q8R2E3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r36Q8R2E3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r36Q8R2E3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vmn1r36Q8R2E3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r36Q8R2E3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmn1r36Q8R2E3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r36Q8R2E3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r36Q8R2E3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r36Q8R2E3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmn1r36Q8R2E3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r36Q8R2E3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r36Q8R2E3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vmn1r36Q8R2E3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r36Q8R2E3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r36Q8R2E3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmn1r36Q8R2E3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Vmn1r36Q8R2E3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms