Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Sf3a1Q8K4Z5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.35■■■□□ 2.29
Sf3a1Q8K4Z5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Sf3a1Q8K4Z5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Sf3a1Q8K4Z5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Sf3a1Q8K4Z5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.33■■■□□ 2.29
Sf3a1Q8K4Z5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Sf3a1Q8K4Z5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.32■■■□□ 2.28
Sf3a1Q8K4Z5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Sf3a1Q8K4Z5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.31■■■□□ 2.28
Sf3a1Q8K4Z5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Sf3a1Q8K4Z5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Sf3a1Q8K4Z5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Sf3a1Q8K4Z5 Gm6821-201ENSMUST00000107540 542 ntBASIC29.3■■■□□ 2.28
Sf3a1Q8K4Z5 Gm30023-201ENSMUST00000197970 889 ntBASIC29.29■■■□□ 2.28
Sf3a1Q8K4Z5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Sf3a1Q8K4Z5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.28■■■□□ 2.28
Sf3a1Q8K4Z5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Sf3a1Q8K4Z5 Gm8503-201ENSMUST00000118131 455 ntBASIC29.26■■■□□ 2.27
Sf3a1Q8K4Z5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.26■■■□□ 2.27
Sf3a1Q8K4Z5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Sf3a1Q8K4Z5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Sf3a1Q8K4Z5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Sf3a1Q8K4Z5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Sf3a1Q8K4Z5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Sf3a1Q8K4Z5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Sf3a1Q8K4Z5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Sf3a1Q8K4Z5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Sf3a1Q8K4Z5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Sf3a1Q8K4Z5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Sf3a1Q8K4Z5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Sf3a1Q8K4Z5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Sf3a1Q8K4Z5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Sf3a1Q8K4Z5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Sf3a1Q8K4Z5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Sf3a1Q8K4Z5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Sf3a1Q8K4Z5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Sf3a1Q8K4Z5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Sf3a1Q8K4Z5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Sf3a1Q8K4Z5 Fezf2-202ENSMUST00000224023 1917 ntBASIC29.17■■■□□ 2.26
Sf3a1Q8K4Z5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Sf3a1Q8K4Z5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Sf3a1Q8K4Z5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.16■■■□□ 2.26
Sf3a1Q8K4Z5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.16■■■□□ 2.26
Sf3a1Q8K4Z5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
Sf3a1Q8K4Z5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.15■■■□□ 2.26
Sf3a1Q8K4Z5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Sf3a1Q8K4Z5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Sf3a1Q8K4Z5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Sf3a1Q8K4Z5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Sf3a1Q8K4Z5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Sf3a1Q8K4Z5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Sf3a1Q8K4Z5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.13■■■□□ 2.25
Sf3a1Q8K4Z5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Sf3a1Q8K4Z5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC29.13■■■□□ 2.25
Sf3a1Q8K4Z5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Sf3a1Q8K4Z5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29.12■■■□□ 2.25
Sf3a1Q8K4Z5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Sf3a1Q8K4Z5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Sf3a1Q8K4Z5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Sf3a1Q8K4Z5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Sf3a1Q8K4Z5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Sf3a1Q8K4Z5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Sf3a1Q8K4Z5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Sf3a1Q8K4Z5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.07■■■□□ 2.24
Sf3a1Q8K4Z5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Sf3a1Q8K4Z5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Sf3a1Q8K4Z5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
Sf3a1Q8K4Z5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Sf3a1Q8K4Z5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.06■■■□□ 2.24
Sf3a1Q8K4Z5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Sf3a1Q8K4Z5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Sf3a1Q8K4Z5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
Sf3a1Q8K4Z5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Sf3a1Q8K4Z5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
Sf3a1Q8K4Z5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Sf3a1Q8K4Z5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.04■■■□□ 2.24
Sf3a1Q8K4Z5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Sf3a1Q8K4Z5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.04■■■□□ 2.24
Sf3a1Q8K4Z5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Sf3a1Q8K4Z5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Sf3a1Q8K4Z5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.01■■■□□ 2.23
Sf3a1Q8K4Z5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29■■■□□ 2.23
Sf3a1Q8K4Z5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Sf3a1Q8K4Z5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Sf3a1Q8K4Z5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Sf3a1Q8K4Z5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.98■■■□□ 2.23
Sf3a1Q8K4Z5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.98■■■□□ 2.23
Sf3a1Q8K4Z5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Sf3a1Q8K4Z5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Sf3a1Q8K4Z5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.97■■■□□ 2.23
Sf3a1Q8K4Z5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC28.96■■■□□ 2.23
Sf3a1Q8K4Z5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Sf3a1Q8K4Z5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Sf3a1Q8K4Z5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Sf3a1Q8K4Z5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Sf3a1Q8K4Z5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Sf3a1Q8K4Z5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Sf3a1Q8K4Z5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Sf3a1Q8K4Z5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms