Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.75■■■□□ 2.19
Shtn1Q8K2Q9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Shtn1Q8K2Q9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
Shtn1Q8K2Q9 Gm30023-201ENSMUST00000197970 889 ntBASIC28.74■■■□□ 2.19
Shtn1Q8K2Q9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Shtn1Q8K2Q9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shtn1Q8K2Q9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shtn1Q8K2Q9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shtn1Q8K2Q9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.7■■■□□ 2.19
Shtn1Q8K2Q9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Shtn1Q8K2Q9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.69■■■□□ 2.18
Shtn1Q8K2Q9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Shtn1Q8K2Q9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Shtn1Q8K2Q9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Shtn1Q8K2Q9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shtn1Q8K2Q9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
Shtn1Q8K2Q9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shtn1Q8K2Q9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shtn1Q8K2Q9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Shtn1Q8K2Q9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shtn1Q8K2Q9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.61■■■□□ 2.17
Shtn1Q8K2Q9 Particl-201ENSMUST00000205370 1560 ntBASIC28.61■■■□□ 2.17
Shtn1Q8K2Q9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Shtn1Q8K2Q9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shtn1Q8K2Q9 Scarna2-201ENSMUST00000157560 414 ntBASIC28.59■■■□□ 2.17
Shtn1Q8K2Q9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shtn1Q8K2Q9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shtn1Q8K2Q9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shtn1Q8K2Q9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Shtn1Q8K2Q9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Shtn1Q8K2Q9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Shtn1Q8K2Q9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shtn1Q8K2Q9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Shtn1Q8K2Q9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Shtn1Q8K2Q9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Shtn1Q8K2Q9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Shtn1Q8K2Q9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Shtn1Q8K2Q9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 Gm12366-201ENSMUST00000121722 873 ntBASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 Gm5786-201ENSMUST00000085368 882 ntBASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Shtn1Q8K2Q9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Shtn1Q8K2Q9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Shtn1Q8K2Q9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
Shtn1Q8K2Q9 Gm4799-201ENSMUST00000095396 657 ntBASIC28.5■■■□□ 2.15
Shtn1Q8K2Q9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Shtn1Q8K2Q9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Shtn1Q8K2Q9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Shtn1Q8K2Q9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
Shtn1Q8K2Q9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Shtn1Q8K2Q9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.48■■■□□ 2.15
Shtn1Q8K2Q9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Shtn1Q8K2Q9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Shtn1Q8K2Q9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.47■■■□□ 2.15
Shtn1Q8K2Q9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Shtn1Q8K2Q9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Shtn1Q8K2Q9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.45■■■□□ 2.14
Shtn1Q8K2Q9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Shtn1Q8K2Q9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shtn1Q8K2Q9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shtn1Q8K2Q9 Gm16437-201ENSMUST00000025669 507 ntBASIC28.45■■■□□ 2.14
Shtn1Q8K2Q9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shtn1Q8K2Q9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Shtn1Q8K2Q9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Shtn1Q8K2Q9 Gm9806-201ENSMUST00000051080 552 ntBASIC28.43■■■□□ 2.14
Shtn1Q8K2Q9 Gm11687-201ENSMUST00000118911 886 ntBASIC28.42■■■□□ 2.14
Shtn1Q8K2Q9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.42■■■□□ 2.14
Shtn1Q8K2Q9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Shtn1Q8K2Q9 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.41■■■□□ 2.14
Shtn1Q8K2Q9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Shtn1Q8K2Q9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Shtn1Q8K2Q9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Shtn1Q8K2Q9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
Shtn1Q8K2Q9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Shtn1Q8K2Q9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shtn1Q8K2Q9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
Shtn1Q8K2Q9 Gm27502-201ENSMUST00000183495 199 ntBASIC28.36■■■□□ 2.13
Shtn1Q8K2Q9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Shtn1Q8K2Q9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Shtn1Q8K2Q9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.35■■■□□ 2.13
Shtn1Q8K2Q9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Shtn1Q8K2Q9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Shtn1Q8K2Q9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.34■■■□□ 2.13
Shtn1Q8K2Q9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Shtn1Q8K2Q9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Shtn1Q8K2Q9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Shtn1Q8K2Q9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Shtn1Q8K2Q9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Shtn1Q8K2Q9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Shtn1Q8K2Q9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Shtn1Q8K2Q9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Shtn1Q8K2Q9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.31■■■□□ 2.12
Shtn1Q8K2Q9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Shtn1Q8K2Q9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.31■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms