Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfx6Q8C7R7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rfx6Q8C7R7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfx6Q8C7R7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.2■■□□□ 1.46
Rfx6Q8C7R7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Rfx6Q8C7R7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Rfx6Q8C7R7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Rfx6Q8C7R7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rfx6Q8C7R7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfx6Q8C7R7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfx6Q8C7R7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rfx6Q8C7R7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rfx6Q8C7R7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfx6Q8C7R7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rfx6Q8C7R7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rfx6Q8C7R7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rfx6Q8C7R7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfx6Q8C7R7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Rfx6Q8C7R7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfx6Q8C7R7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Rfx6Q8C7R7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.12■■□□□ 1.45
Rfx6Q8C7R7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rfx6Q8C7R7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rfx6Q8C7R7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rfx6Q8C7R7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rfx6Q8C7R7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.1■■□□□ 1.45
Rfx6Q8C7R7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rfx6Q8C7R7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Rfx6Q8C7R7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rfx6Q8C7R7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rfx6Q8C7R7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rfx6Q8C7R7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rfx6Q8C7R7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfx6Q8C7R7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfx6Q8C7R7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rfx6Q8C7R7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rfx6Q8C7R7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
Rfx6Q8C7R7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Rfx6Q8C7R7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rfx6Q8C7R7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rfx6Q8C7R7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx6Q8C7R7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx6Q8C7R7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx6Q8C7R7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx6Q8C7R7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx6Q8C7R7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfx6Q8C7R7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfx6Q8C7R7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Rfx6Q8C7R7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.01■■□□□ 1.43
Rfx6Q8C7R7 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.01■■□□□ 1.43
Rfx6Q8C7R7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rfx6Q8C7R7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rfx6Q8C7R7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24■■□□□ 1.43
Rfx6Q8C7R7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
Rfx6Q8C7R7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24■■□□□ 1.43
Rfx6Q8C7R7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.99■■□□□ 1.43
Rfx6Q8C7R7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rfx6Q8C7R7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Rfx6Q8C7R7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rfx6Q8C7R7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Rfx6Q8C7R7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rfx6Q8C7R7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rfx6Q8C7R7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rfx6Q8C7R7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Rfx6Q8C7R7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.94■■□□□ 1.42
Rfx6Q8C7R7 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.94■■□□□ 1.42
Rfx6Q8C7R7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
Rfx6Q8C7R7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rfx6Q8C7R7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rfx6Q8C7R7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rfx6Q8C7R7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rfx6Q8C7R7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx6Q8C7R7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.9■■□□□ 1.42
Rfx6Q8C7R7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx6Q8C7R7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Rfx6Q8C7R7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rfx6Q8C7R7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.89■■□□□ 1.41
Rfx6Q8C7R7 Zfp131-205ENSMUST00000223812 663 ntBASIC23.89■■□□□ 1.41
Rfx6Q8C7R7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rfx6Q8C7R7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rfx6Q8C7R7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rfx6Q8C7R7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rfx6Q8C7R7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.87■■□□□ 1.41
Rfx6Q8C7R7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx6Q8C7R7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.86■■□□□ 1.41
Rfx6Q8C7R7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx6Q8C7R7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx6Q8C7R7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx6Q8C7R7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx6Q8C7R7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx6Q8C7R7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rfx6Q8C7R7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rfx6Q8C7R7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Rfx6Q8C7R7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.83■■□□□ 1.41
Rfx6Q8C7R7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.83■■□□□ 1.41
Rfx6Q8C7R7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.83■■□□□ 1.41
Rfx6Q8C7R7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfx6Q8C7R7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfx6Q8C7R7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rfx6Q8C7R7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms