Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sh3rf3Q8C120 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Sh3rf3Q8C120 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Sh3rf3Q8C120 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sh3rf3Q8C120 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sh3rf3Q8C120 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Sh3rf3Q8C120 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sh3rf3Q8C120 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sh3rf3Q8C120 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sh3rf3Q8C120 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.94■■□□□ 1.58
Sh3rf3Q8C120 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Sh3rf3Q8C120 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Sh3rf3Q8C120 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sh3rf3Q8C120 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.93■■□□□ 1.58
Sh3rf3Q8C120 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sh3rf3Q8C120 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Sh3rf3Q8C120 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Sh3rf3Q8C120 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Sh3rf3Q8C120 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Sh3rf3Q8C120 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.89■■□□□ 1.58
Sh3rf3Q8C120 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.89■■□□□ 1.58
Sh3rf3Q8C120 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Sh3rf3Q8C120 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Sh3rf3Q8C120 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Sh3rf3Q8C120 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sh3rf3Q8C120 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sh3rf3Q8C120 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sh3rf3Q8C120 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3rf3Q8C120 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.85■■□□□ 1.57
Sh3rf3Q8C120 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3rf3Q8C120 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3rf3Q8C120 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3rf3Q8C120 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3rf3Q8C120 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sh3rf3Q8C120 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sh3rf3Q8C120 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3rf3Q8C120 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Sh3rf3Q8C120 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3rf3Q8C120 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.83■■□□□ 1.57
Sh3rf3Q8C120 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3rf3Q8C120 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Sh3rf3Q8C120 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Sh3rf3Q8C120 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Sh3rf3Q8C120 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.8■■□□□ 1.56
Sh3rf3Q8C120 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sh3rf3Q8C120 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sh3rf3Q8C120 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Sh3rf3Q8C120 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sh3rf3Q8C120 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Sh3rf3Q8C120 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sh3rf3Q8C120 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sh3rf3Q8C120 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Sh3rf3Q8C120 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sh3rf3Q8C120 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.77■■□□□ 1.56
Sh3rf3Q8C120 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sh3rf3Q8C120 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Sh3rf3Q8C120 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Sh3rf3Q8C120 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sh3rf3Q8C120 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3rf3Q8C120 Gm30023-201ENSMUST00000197970 889 ntBASIC24.74■■□□□ 1.55
Sh3rf3Q8C120 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3rf3Q8C120 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3rf3Q8C120 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3rf3Q8C120 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3rf3Q8C120 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sh3rf3Q8C120 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Sh3rf3Q8C120 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.71■■□□□ 1.55
Sh3rf3Q8C120 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Sh3rf3Q8C120 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3rf3Q8C120 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
Sh3rf3Q8C120 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Sh3rf3Q8C120 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sh3rf3Q8C120 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Sh3rf3Q8C120 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3rf3Q8C120 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Sh3rf3Q8C120 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.68■■□□□ 1.54
Sh3rf3Q8C120 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sh3rf3Q8C120 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Sh3rf3Q8C120 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Sh3rf3Q8C120 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.67■■□□□ 1.54
Sh3rf3Q8C120 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Sh3rf3Q8C120 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Sh3rf3Q8C120 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
Sh3rf3Q8C120 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sh3rf3Q8C120 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sh3rf3Q8C120 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3rf3Q8C120 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3rf3Q8C120 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.66■■□□□ 1.54
Sh3rf3Q8C120 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3rf3Q8C120 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
Sh3rf3Q8C120 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.65■■□□□ 1.54
Sh3rf3Q8C120 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3rf3Q8C120 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Sh3rf3Q8C120 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sh3rf3Q8C120 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf3Q8C120 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf3Q8C120 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf3Q8C120 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf3Q8C120 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf3Q8C120 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms