Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc30Q8BVF4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Ccdc30Q8BVF4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Ccdc30Q8BVF4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccdc30Q8BVF4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.21■■■□□ 2.59
Ccdc30Q8BVF4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Ccdc30Q8BVF4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.18■■■□□ 2.58
Ccdc30Q8BVF4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc30Q8BVF4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.17■■■□□ 2.58
Ccdc30Q8BVF4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc30Q8BVF4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc30Q8BVF4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ccdc30Q8BVF4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.15■■■□□ 2.58
Ccdc30Q8BVF4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc30Q8BVF4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc30Q8BVF4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc30Q8BVF4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc30Q8BVF4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Ccdc30Q8BVF4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc30Q8BVF4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ccdc30Q8BVF4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
Ccdc30Q8BVF4 Gm30023-201ENSMUST00000197970 889 ntBASIC31.09■■■□□ 2.57
Ccdc30Q8BVF4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ccdc30Q8BVF4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ccdc30Q8BVF4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
Ccdc30Q8BVF4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Ccdc30Q8BVF4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ccdc30Q8BVF4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.06■■■□□ 2.56
Ccdc30Q8BVF4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.05■■■□□ 2.56
Ccdc30Q8BVF4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc30Q8BVF4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ccdc30Q8BVF4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
Ccdc30Q8BVF4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.04■■■□□ 2.56
Ccdc30Q8BVF4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.03■■■□□ 2.56
Ccdc30Q8BVF4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Ccdc30Q8BVF4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc30Q8BVF4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ccdc30Q8BVF4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Ccdc30Q8BVF4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31■■■□□ 2.55
Ccdc30Q8BVF4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
Ccdc30Q8BVF4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc30Q8BVF4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ccdc30Q8BVF4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ccdc30Q8BVF4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ccdc30Q8BVF4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccdc30Q8BVF4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.95■■■□□ 2.55
Ccdc30Q8BVF4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Ccdc30Q8BVF4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc30Q8BVF4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ccdc30Q8BVF4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.93■■■□□ 2.54
Ccdc30Q8BVF4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Ccdc30Q8BVF4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ccdc30Q8BVF4 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.92■■■□□ 2.54
Ccdc30Q8BVF4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ccdc30Q8BVF4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ccdc30Q8BVF4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
Ccdc30Q8BVF4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccdc30Q8BVF4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Ccdc30Q8BVF4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc30Q8BVF4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc30Q8BVF4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc30Q8BVF4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ccdc30Q8BVF4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Ccdc30Q8BVF4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Ccdc30Q8BVF4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.86■■■□□ 2.53
Ccdc30Q8BVF4 Nkain2-201ENSMUST00000092602 558 ntBASIC30.86■■■□□ 2.53
Ccdc30Q8BVF4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Ccdc30Q8BVF4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Ccdc30Q8BVF4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Ccdc30Q8BVF4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Ccdc30Q8BVF4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.84■■■□□ 2.53
Ccdc30Q8BVF4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.84■■■□□ 2.53
Ccdc30Q8BVF4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc30Q8BVF4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc30Q8BVF4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.83■■■□□ 2.53
Ccdc30Q8BVF4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Ccdc30Q8BVF4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.82■■■□□ 2.52
Ccdc30Q8BVF4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc30Q8BVF4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.81■■■□□ 2.52
Ccdc30Q8BVF4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc30Q8BVF4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc30Q8BVF4 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.8■■■□□ 2.52
Ccdc30Q8BVF4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc30Q8BVF4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccdc30Q8BVF4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.79■■■□□ 2.52
Ccdc30Q8BVF4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc30Q8BVF4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.79■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms