Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf7Q8BTV2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf7Q8BTV2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Cpsf7Q8BTV2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cpsf7Q8BTV2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf7Q8BTV2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf7Q8BTV2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Cpsf7Q8BTV2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cpsf7Q8BTV2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf7Q8BTV2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf7Q8BTV2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.89■■□□□ 1.41
Cpsf7Q8BTV2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf7Q8BTV2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf7Q8BTV2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf7Q8BTV2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf7Q8BTV2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Cpsf7Q8BTV2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf7Q8BTV2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf7Q8BTV2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Cpsf7Q8BTV2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf7Q8BTV2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf7Q8BTV2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf7Q8BTV2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf7Q8BTV2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Zfp131-205ENSMUST00000223812 663 ntBASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Cpsf7Q8BTV2 Gm16148-201ENSMUST00000119653 893 ntBASIC23.83■■□□□ 1.41
Cpsf7Q8BTV2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cpsf7Q8BTV2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Cpsf7Q8BTV2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cpsf7Q8BTV2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf7Q8BTV2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf7Q8BTV2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf7Q8BTV2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf7Q8BTV2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf7Q8BTV2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf7Q8BTV2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf7Q8BTV2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf7Q8BTV2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf7Q8BTV2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf7Q8BTV2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf7Q8BTV2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf7Q8BTV2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Cpsf7Q8BTV2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Cpsf7Q8BTV2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Cpsf7Q8BTV2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cpsf7Q8BTV2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cpsf7Q8BTV2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cpsf7Q8BTV2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cpsf7Q8BTV2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cpsf7Q8BTV2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf7Q8BTV2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf7Q8BTV2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf7Q8BTV2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf7Q8BTV2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Cpsf7Q8BTV2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Cpsf7Q8BTV2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.69■■□□□ 1.38
Cpsf7Q8BTV2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf7Q8BTV2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf7Q8BTV2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf7Q8BTV2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf7Q8BTV2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cpsf7Q8BTV2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Cpsf7Q8BTV2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cpsf7Q8BTV2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.66■■□□□ 1.38
Cpsf7Q8BTV2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cpsf7Q8BTV2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.65■■□□□ 1.38
Cpsf7Q8BTV2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cpsf7Q8BTV2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf7Q8BTV2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf7Q8BTV2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf7Q8BTV2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Cpsf7Q8BTV2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf7Q8BTV2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf7Q8BTV2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Cpsf7Q8BTV2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf7Q8BTV2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Cpsf7Q8BTV2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf7Q8BTV2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf7Q8BTV2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms