Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SynbQ8BI41 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SynbQ8BI41 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SynbQ8BI41 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SynbQ8BI41 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.57■■□□□ 1.2
SynbQ8BI41 Mir6538-201ENSMUST00000183713 110 ntBASIC22.57■■□□□ 1.2
SynbQ8BI41 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SynbQ8BI41 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SynbQ8BI41 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SynbQ8BI41 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SynbQ8BI41 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.56■■□□□ 1.2
SynbQ8BI41 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SynbQ8BI41 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.54■■□□□ 1.2
SynbQ8BI41 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SynbQ8BI41 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SynbQ8BI41 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SynbQ8BI41 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SynbQ8BI41 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SynbQ8BI41 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.53■■□□□ 1.2
SynbQ8BI41 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.53■■□□□ 1.2
SynbQ8BI41 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SynbQ8BI41 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SynbQ8BI41 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SynbQ8BI41 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SynbQ8BI41 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.52■■□□□ 1.2
SynbQ8BI41 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SynbQ8BI41 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SynbQ8BI41 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SynbQ8BI41 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SynbQ8BI41 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SynbQ8BI41 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SynbQ8BI41 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SynbQ8BI41 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
SynbQ8BI41 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SynbQ8BI41 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SynbQ8BI41 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SynbQ8BI41 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SynbQ8BI41 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SynbQ8BI41 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SynbQ8BI41 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SynbQ8BI41 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SynbQ8BI41 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SynbQ8BI41 Gm11175-201ENSMUST00000116172 543 ntBASIC22.46■■□□□ 1.19
SynbQ8BI41 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SynbQ8BI41 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SynbQ8BI41 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.45■■□□□ 1.18
SynbQ8BI41 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SynbQ8BI41 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SynbQ8BI41 Amer2-203ENSMUST00000225247 2662 ntBASIC22.44■■□□□ 1.18
SynbQ8BI41 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SynbQ8BI41 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
SynbQ8BI41 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SynbQ8BI41 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
SynbQ8BI41 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.43■■□□□ 1.18
SynbQ8BI41 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.42■■□□□ 1.18
SynbQ8BI41 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SynbQ8BI41 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SynbQ8BI41 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SynbQ8BI41 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SynbQ8BI41 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SynbQ8BI41 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SynbQ8BI41 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SynbQ8BI41 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
SynbQ8BI41 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SynbQ8BI41 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.37■■□□□ 1.17
SynbQ8BI41 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SynbQ8BI41 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SynbQ8BI41 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SynbQ8BI41 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SynbQ8BI41 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SynbQ8BI41 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SynbQ8BI41 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.35■■□□□ 1.17
SynbQ8BI41 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SynbQ8BI41 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SynbQ8BI41 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SynbQ8BI41 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SynbQ8BI41 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SynbQ8BI41 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SynbQ8BI41 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SynbQ8BI41 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
SynbQ8BI41 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SynbQ8BI41 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
SynbQ8BI41 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.32■■□□□ 1.16
SynbQ8BI41 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.32■■□□□ 1.16
SynbQ8BI41 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SynbQ8BI41 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SynbQ8BI41 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SynbQ8BI41 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SynbQ8BI41 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SynbQ8BI41 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.3■■□□□ 1.16
SynbQ8BI41 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SynbQ8BI41 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SynbQ8BI41 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SynbQ8BI41 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SynbQ8BI41 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SynbQ8BI41 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.29■■□□□ 1.16
SynbQ8BI41 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SynbQ8BI41 Cap2-205ENSMUST00000225824 1634 ntBASIC22.28■■□□□ 1.16
SynbQ8BI41 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SynbQ8BI41 Gm6311-201ENSMUST00000073790 878 ntBASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms