Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cldn34b3Q80ZS5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cldn34b3Q80ZS5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cldn34b3Q80ZS5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cldn34b3Q80ZS5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.28■■□□□ 1.16
Cldn34b3Q80ZS5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cldn34b3Q80ZS5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cldn34b3Q80ZS5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cldn34b3Q80ZS5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cldn34b3Q80ZS5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.26■■□□□ 1.15
Cldn34b3Q80ZS5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cldn34b3Q80ZS5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cldn34b3Q80ZS5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Cldn34b3Q80ZS5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn34b3Q80ZS5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn34b3Q80ZS5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn34b3Q80ZS5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cldn34b3Q80ZS5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cldn34b3Q80ZS5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cldn34b3Q80ZS5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.22■■□□□ 1.15
Cldn34b3Q80ZS5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.21■■□□□ 1.15
Cldn34b3Q80ZS5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Cldn34b3Q80ZS5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cldn34b3Q80ZS5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cldn34b3Q80ZS5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cldn34b3Q80ZS5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Cldn34b3Q80ZS5 Gm30023-201ENSMUST00000197970 889 ntBASIC22.19■■□□□ 1.14
Cldn34b3Q80ZS5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
Cldn34b3Q80ZS5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cldn34b3Q80ZS5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.18■■□□□ 1.14
Cldn34b3Q80ZS5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cldn34b3Q80ZS5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cldn34b3Q80ZS5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.17■■□□□ 1.14
Cldn34b3Q80ZS5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cldn34b3Q80ZS5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cldn34b3Q80ZS5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.17■■□□□ 1.14
Cldn34b3Q80ZS5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cldn34b3Q80ZS5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 Nkain2-201ENSMUST00000092602 558 ntBASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cldn34b3Q80ZS5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cldn34b3Q80ZS5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cldn34b3Q80ZS5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cldn34b3Q80ZS5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Cldn34b3Q80ZS5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Cldn34b3Q80ZS5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cldn34b3Q80ZS5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cldn34b3Q80ZS5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn34b3Q80ZS5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cldn34b3Q80ZS5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cldn34b3Q80ZS5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Cldn34b3Q80ZS5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Cldn34b3Q80ZS5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Cldn34b3Q80ZS5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cldn34b3Q80ZS5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cldn34b3Q80ZS5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cldn34b3Q80ZS5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cldn34b3Q80ZS5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.06■■□□□ 1.12
Cldn34b3Q80ZS5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.06■■□□□ 1.12
Cldn34b3Q80ZS5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cldn34b3Q80ZS5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cldn34b3Q80ZS5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cldn34b3Q80ZS5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cldn34b3Q80ZS5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cldn34b3Q80ZS5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cldn34b3Q80ZS5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Cldn34b3Q80ZS5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.03■■□□□ 1.12
Cldn34b3Q80ZS5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cldn34b3Q80ZS5 Gm6821-201ENSMUST00000107540 542 ntBASIC22.02■■□□□ 1.12
Cldn34b3Q80ZS5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cldn34b3Q80ZS5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22■■□□□ 1.11
Cldn34b3Q80ZS5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cldn34b3Q80ZS5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cldn34b3Q80ZS5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cldn34b3Q80ZS5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms