Protein–RNA interactions for Protein: Q80XU8

Lrfn4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, mousemouse

Predictions only

Length 636 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn4Q80XU8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrfn4Q80XU8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrfn4Q80XU8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrfn4Q80XU8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrfn4Q80XU8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Lrfn4Q80XU8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.21■□□□□ 0.99
Lrfn4Q80XU8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Lrfn4Q80XU8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrfn4Q80XU8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn4Q80XU8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn4Q80XU8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn4Q80XU8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lrfn4Q80XU8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrfn4Q80XU8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrfn4Q80XU8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrfn4Q80XU8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Lrfn4Q80XU8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrfn4Q80XU8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrfn4Q80XU8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrfn4Q80XU8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lrfn4Q80XU8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrfn4Q80XU8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrfn4Q80XU8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.14■□□□□ 0.97
Lrfn4Q80XU8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrfn4Q80XU8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.12■□□□□ 0.97
Lrfn4Q80XU8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrfn4Q80XU8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.11■□□□□ 0.97
Lrfn4Q80XU8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrfn4Q80XU8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Lrfn4Q80XU8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lrfn4Q80XU8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.1■□□□□ 0.97
Lrfn4Q80XU8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Lrfn4Q80XU8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lrfn4Q80XU8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.09■□□□□ 0.97
Lrfn4Q80XU8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrfn4Q80XU8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lrfn4Q80XU8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lrfn4Q80XU8 Gm30023-201ENSMUST00000197970 889 ntBASIC21.08■□□□□ 0.97
Lrfn4Q80XU8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Lrfn4Q80XU8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lrfn4Q80XU8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrfn4Q80XU8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.07■□□□□ 0.96
Lrfn4Q80XU8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Lrfn4Q80XU8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrfn4Q80XU8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrfn4Q80XU8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lrfn4Q80XU8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrfn4Q80XU8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Lrfn4Q80XU8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrfn4Q80XU8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lrfn4Q80XU8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrfn4Q80XU8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lrfn4Q80XU8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrfn4Q80XU8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lrfn4Q80XU8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lrfn4Q80XU8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrfn4Q80XU8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrfn4Q80XU8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lrfn4Q80XU8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Lrfn4Q80XU8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Lrfn4Q80XU8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Lrfn4Q80XU8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrfn4Q80XU8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lrfn4Q80XU8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrfn4Q80XU8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lrfn4Q80XU8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms