Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trim36Q80WG7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.84■■□□□ 1.25
Trim36Q80WG7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Trim36Q80WG7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim36Q80WG7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Trim36Q80WG7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Trim36Q80WG7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim36Q80WG7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Trim36Q80WG7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.82■■□□□ 1.24
Trim36Q80WG7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trim36Q80WG7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Trim36Q80WG7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trim36Q80WG7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim36Q80WG7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim36Q80WG7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.8■■□□□ 1.24
Trim36Q80WG7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Trim36Q80WG7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim36Q80WG7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trim36Q80WG7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Trim36Q80WG7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trim36Q80WG7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trim36Q80WG7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim36Q80WG7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim36Q80WG7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim36Q80WG7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.76■■□□□ 1.23
Trim36Q80WG7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trim36Q80WG7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trim36Q80WG7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trim36Q80WG7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim36Q80WG7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trim36Q80WG7 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.74■■□□□ 1.23
Trim36Q80WG7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Trim36Q80WG7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim36Q80WG7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim36Q80WG7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim36Q80WG7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim36Q80WG7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trim36Q80WG7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Trim36Q80WG7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Trim36Q80WG7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.71■■□□□ 1.23
Trim36Q80WG7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim36Q80WG7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Trim36Q80WG7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim36Q80WG7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Trim36Q80WG7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.7■■□□□ 1.22
Trim36Q80WG7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim36Q80WG7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim36Q80WG7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim36Q80WG7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim36Q80WG7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Trim36Q80WG7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim36Q80WG7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim36Q80WG7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim36Q80WG7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.68■■□□□ 1.22
Trim36Q80WG7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim36Q80WG7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim36Q80WG7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim36Q80WG7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim36Q80WG7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Trim36Q80WG7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim36Q80WG7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.64■■□□□ 1.21
Trim36Q80WG7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim36Q80WG7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim36Q80WG7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
Trim36Q80WG7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Trim36Q80WG7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.63■■□□□ 1.21
Trim36Q80WG7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim36Q80WG7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim36Q80WG7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim36Q80WG7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim36Q80WG7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim36Q80WG7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim36Q80WG7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim36Q80WG7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.61■■□□□ 1.21
Trim36Q80WG7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Trim36Q80WG7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim36Q80WG7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.6■■□□□ 1.21
Trim36Q80WG7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim36Q80WG7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim36Q80WG7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim36Q80WG7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim36Q80WG7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.59■■□□□ 1.21
Trim36Q80WG7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Trim36Q80WG7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim36Q80WG7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Trim36Q80WG7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.58■■□□□ 1.21
Trim36Q80WG7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim36Q80WG7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim36Q80WG7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim36Q80WG7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.57■■□□□ 1.2
Trim36Q80WG7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim36Q80WG7 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.57■■□□□ 1.2
Trim36Q80WG7 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.57■■□□□ 1.2
Trim36Q80WG7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Trim36Q80WG7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim36Q80WG7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim36Q80WG7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim36Q80WG7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.55■■□□□ 1.2
Trim36Q80WG7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim36Q80WG7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms