Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
Prpf40bQ80W14 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Prpf40bQ80W14 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Prpf40bQ80W14 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Prpf40bQ80W14 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Prpf40bQ80W14 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Prpf40bQ80W14 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.58■■■□□ 2.01
Prpf40bQ80W14 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.57■■■□□ 2
Prpf40bQ80W14 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Prpf40bQ80W14 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Prpf40bQ80W14 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.57■■■□□ 2
Prpf40bQ80W14 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.56■■■□□ 2
Prpf40bQ80W14 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.56■■■□□ 2
Prpf40bQ80W14 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Prpf40bQ80W14 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.55■■■□□ 2
Prpf40bQ80W14 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.55■■■□□ 2
Prpf40bQ80W14 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Prpf40bQ80W14 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Prpf40bQ80W14 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.55■■■□□ 2
Prpf40bQ80W14 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.54■■■□□ 2
Prpf40bQ80W14 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.53■■■□□ 2
Prpf40bQ80W14 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.53■■■□□ 2
Prpf40bQ80W14 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.53■■■□□ 2
Prpf40bQ80W14 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.53■■■□□ 2
Prpf40bQ80W14 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Prpf40bQ80W14 Amer2-203ENSMUST00000225247 2662 ntBASIC27.52■■■□□ 2
Prpf40bQ80W14 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.52■■■□□ 2
Prpf40bQ80W14 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Prpf40bQ80W14 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Prpf40bQ80W14 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.51■■□□□ 1.99
Prpf40bQ80W14 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.51■■□□□ 1.99
Prpf40bQ80W14 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Prpf40bQ80W14 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Prpf40bQ80W14 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.5■■□□□ 1.99
Prpf40bQ80W14 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.5■■□□□ 1.99
Prpf40bQ80W14 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.5■■□□□ 1.99
Prpf40bQ80W14 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
Prpf40bQ80W14 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Prpf40bQ80W14 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Prpf40bQ80W14 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Prpf40bQ80W14 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Prpf40bQ80W14 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Prpf40bQ80W14 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Prpf40bQ80W14 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Prpf40bQ80W14 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Prpf40bQ80W14 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.44■■□□□ 1.98
Prpf40bQ80W14 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Prpf40bQ80W14 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.43■■□□□ 1.98
Prpf40bQ80W14 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Prpf40bQ80W14 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.42■■□□□ 1.98
Prpf40bQ80W14 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Prpf40bQ80W14 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Prpf40bQ80W14 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Prpf40bQ80W14 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Prpf40bQ80W14 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Prpf40bQ80W14 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.39■■□□□ 1.98
Prpf40bQ80W14 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Prpf40bQ80W14 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Prpf40bQ80W14 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Prpf40bQ80W14 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Prpf40bQ80W14 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.37■■□□□ 1.97
Prpf40bQ80W14 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Prpf40bQ80W14 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.37■■□□□ 1.97
Prpf40bQ80W14 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Prpf40bQ80W14 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.36■■□□□ 1.97
Prpf40bQ80W14 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Prpf40bQ80W14 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Prpf40bQ80W14 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Prpf40bQ80W14 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Prpf40bQ80W14 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Prpf40bQ80W14 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
Prpf40bQ80W14 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
Prpf40bQ80W14 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Prpf40bQ80W14 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Prpf40bQ80W14 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.33■■□□□ 1.97
Prpf40bQ80W14 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Prpf40bQ80W14 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.31■■□□□ 1.96
Prpf40bQ80W14 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Prpf40bQ80W14 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Prpf40bQ80W14 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Prpf40bQ80W14 Gm15039-201ENSMUST00000118914 875 ntBASIC27.3■■□□□ 1.96
Prpf40bQ80W14 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.3■■□□□ 1.96
Prpf40bQ80W14 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Prpf40bQ80W14 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Prpf40bQ80W14 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Prpf40bQ80W14 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Prpf40bQ80W14 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Prpf40bQ80W14 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Prpf40bQ80W14 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
Prpf40bQ80W14 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Prpf40bQ80W14 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Prpf40bQ80W14 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Prpf40bQ80W14 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Prpf40bQ80W14 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Prpf40bQ80W14 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Prpf40bQ80W14 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.23■■□□□ 1.95
Prpf40bQ80W14 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Prpf40bQ80W14 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Prpf40bQ80W14 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.22■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms