Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Syne1Q6ZWR6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Syne1Q6ZWR6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Syne1Q6ZWR6 Gm4799-201ENSMUST00000095396 657 ntBASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC8.17□□□□□ -1.1
Syne1Q6ZWR6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Syne1Q6ZWR6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Syne1Q6ZWR6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Syne1Q6ZWR6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Syne1Q6ZWR6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Syne1Q6ZWR6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Syne1Q6ZWR6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Syne1Q6ZWR6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Syne1Q6ZWR6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Syne1Q6ZWR6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Syne1Q6ZWR6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syne1Q6ZWR6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC8.13□□□□□ -1.11
Syne1Q6ZWR6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syne1Q6ZWR6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syne1Q6ZWR6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Syne1Q6ZWR6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syne1Q6ZWR6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syne1Q6ZWR6 Gm6311-201ENSMUST00000073790 878 ntBASIC8.12□□□□□ -1.11
Syne1Q6ZWR6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syne1Q6ZWR6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC8.12□□□□□ -1.11
Syne1Q6ZWR6 Gm9806-201ENSMUST00000051080 552 ntBASIC8.12□□□□□ -1.11
Syne1Q6ZWR6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syne1Q6ZWR6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Syne1Q6ZWR6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syne1Q6ZWR6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syne1Q6ZWR6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Gm12366-201ENSMUST00000121722 873 ntBASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Gm5786-201ENSMUST00000085368 882 ntBASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Pcf11-205ENSMUST00000208255 1720 ntBASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Syne1Q6ZWR6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Particl-201ENSMUST00000205370 1560 ntBASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Scarna2-201ENSMUST00000157560 414 ntBASIC8.1□□□□□ -1.11
Syne1Q6ZWR6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Syne1Q6ZWR6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Syne1Q6ZWR6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC8.09□□□□□ -1.11
Syne1Q6ZWR6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Syne1Q6ZWR6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms