Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Clcn1Q64347 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Clcn1Q64347 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Clcn1Q64347 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.73■■■□□ 2.51
Clcn1Q64347 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.73■■■□□ 2.51
Clcn1Q64347 Cap2-205ENSMUST00000225824 1634 ntBASIC30.73■■■□□ 2.51
Clcn1Q64347 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
Clcn1Q64347 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Clcn1Q64347 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Clcn1Q64347 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Clcn1Q64347 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Clcn1Q64347 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.71■■■□□ 2.51
Clcn1Q64347 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Clcn1Q64347 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Clcn1Q64347 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Clcn1Q64347 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Clcn1Q64347 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Clcn1Q64347 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Clcn1Q64347 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Clcn1Q64347 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Clcn1Q64347 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.67■■■□□ 2.5
Clcn1Q64347 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Clcn1Q64347 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.66■■■□□ 2.5
Clcn1Q64347 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.66■■■□□ 2.5
Clcn1Q64347 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.66■■■□□ 2.5
Clcn1Q64347 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Clcn1Q64347 Gm6311-201ENSMUST00000073790 878 ntBASIC30.65■■■□□ 2.5
Clcn1Q64347 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Clcn1Q64347 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Clcn1Q64347 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.63■■■□□ 2.49
Clcn1Q64347 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.62■■■□□ 2.49
Clcn1Q64347 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Clcn1Q64347 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
Clcn1Q64347 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Clcn1Q64347 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Clcn1Q64347 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.6■■■□□ 2.49
Clcn1Q64347 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Clcn1Q64347 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.59■■■□□ 2.49
Clcn1Q64347 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Clcn1Q64347 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.58■■■□□ 2.49
Clcn1Q64347 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Clcn1Q64347 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Clcn1Q64347 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.56■■■□□ 2.48
Clcn1Q64347 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.56■■■□□ 2.48
Clcn1Q64347 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
Clcn1Q64347 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Clcn1Q64347 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Clcn1Q64347 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Clcn1Q64347 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Clcn1Q64347 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Clcn1Q64347 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.52■■■□□ 2.48
Clcn1Q64347 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Clcn1Q64347 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Clcn1Q64347 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Clcn1Q64347 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Clcn1Q64347 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Clcn1Q64347 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Clcn1Q64347 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Clcn1Q64347 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Clcn1Q64347 Particl-201ENSMUST00000205370 1560 ntBASIC30.49■■■□□ 2.47
Clcn1Q64347 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Clcn1Q64347 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Clcn1Q64347 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Clcn1Q64347 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Clcn1Q64347 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Clcn1Q64347 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
Clcn1Q64347 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Clcn1Q64347 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Clcn1Q64347 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Clcn1Q64347 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
Clcn1Q64347 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Clcn1Q64347 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Clcn1Q64347 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Clcn1Q64347 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Clcn1Q64347 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Clcn1Q64347 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
Clcn1Q64347 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Clcn1Q64347 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Clcn1Q64347 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.42■■■□□ 2.46
Clcn1Q64347 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.41■■■□□ 2.46
Clcn1Q64347 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Clcn1Q64347 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Clcn1Q64347 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Clcn1Q64347 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30.36■■■□□ 2.45
Clcn1Q64347 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Clcn1Q64347 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Clcn1Q64347 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Clcn1Q64347 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
Clcn1Q64347 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Clcn1Q64347 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Clcn1Q64347 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Clcn1Q64347 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Clcn1Q64347 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Clcn1Q64347 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Clcn1Q64347 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Clcn1Q64347 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.28■■■□□ 2.44
Clcn1Q64347 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Clcn1Q64347 Scarna2-201ENSMUST00000157560 414 ntBASIC30.27■■■□□ 2.44
Clcn1Q64347 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Clcn1Q64347 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms