Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa4Q62425 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndufa4Q62425 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufa4Q62425 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.24■□□□□ 0.35
Ndufa4Q62425 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufa4Q62425 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ndufa4Q62425 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ndufa4Q62425 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufa4Q62425 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ndufa4Q62425 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufa4Q62425 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ndufa4Q62425 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndufa4Q62425 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndufa4Q62425 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ndufa4Q62425 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ndufa4Q62425 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndufa4Q62425 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndufa4Q62425 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufa4Q62425 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ndufa4Q62425 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndufa4Q62425 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufa4Q62425 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.2■□□□□ 0.34
Ndufa4Q62425 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ndufa4Q62425 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufa4Q62425 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufa4Q62425 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufa4Q62425 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ndufa4Q62425 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufa4Q62425 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufa4Q62425 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ndufa4Q62425 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.18■□□□□ 0.34
Ndufa4Q62425 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndufa4Q62425 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndufa4Q62425 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ndufa4Q62425 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa4Q62425 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa4Q62425 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa4Q62425 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa4Q62425 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa4Q62425 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa4Q62425 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa4Q62425 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa4Q62425 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ndufa4Q62425 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa4Q62425 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa4Q62425 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa4Q62425 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa4Q62425 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa4Q62425 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa4Q62425 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa4Q62425 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa4Q62425 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa4Q62425 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ndufa4Q62425 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa4Q62425 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ndufa4Q62425 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ndufa4Q62425 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa4Q62425 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa4Q62425 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa4Q62425 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa4Q62425 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ndufa4Q62425 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa4Q62425 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa4Q62425 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa4Q62425 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.1■□□□□ 0.33
Ndufa4Q62425 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa4Q62425 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa4Q62425 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa4Q62425 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa4Q62425 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.09■□□□□ 0.33
Ndufa4Q62425 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa4Q62425 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufa4Q62425 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufa4Q62425 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ndufa4Q62425 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ndufa4Q62425 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.08■□□□□ 0.32
Ndufa4Q62425 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndufa4Q62425 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufa4Q62425 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ndufa4Q62425 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ndufa4Q62425 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ndufa4Q62425 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufa4Q62425 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ndufa4Q62425 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ndufa4Q62425 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufa4Q62425 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufa4Q62425 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufa4Q62425 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ndufa4Q62425 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufa4Q62425 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ndufa4Q62425 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa4Q62425 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa4Q62425 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa4Q62425 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.05■□□□□ 0.32
Ndufa4Q62425 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ndufa4Q62425 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ndufa4Q62425 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufa4Q62425 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ndufa4Q62425 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ndufa4Q62425 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms