Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Rpa2Q62193 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpa2Q62193 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Rpa2Q62193 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.89■■□□□ 1.09
Rpa2Q62193 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rpa2Q62193 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Rpa2Q62193 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.87■■□□□ 1.09
Rpa2Q62193 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rpa2Q62193 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rpa2Q62193 Gm6821-201ENSMUST00000107540 542 ntBASIC21.85■■□□□ 1.09
Rpa2Q62193 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rpa2Q62193 Nkain2-201ENSMUST00000092602 558 ntBASIC21.84■■□□□ 1.09
Rpa2Q62193 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rpa2Q62193 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rpa2Q62193 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rpa2Q62193 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rpa2Q62193 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.83■■□□□ 1.09
Rpa2Q62193 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.83■■□□□ 1.09
Rpa2Q62193 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rpa2Q62193 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rpa2Q62193 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpa2Q62193 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.82■■□□□ 1.08
Rpa2Q62193 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rpa2Q62193 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpa2Q62193 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpa2Q62193 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rpa2Q62193 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.81■■□□□ 1.08
Rpa2Q62193 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpa2Q62193 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpa2Q62193 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpa2Q62193 Gm30023-201ENSMUST00000197970 889 ntBASIC21.8■■□□□ 1.08
Rpa2Q62193 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpa2Q62193 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpa2Q62193 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpa2Q62193 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
Rpa2Q62193 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Rpa2Q62193 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.79■■□□□ 1.08
Rpa2Q62193 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Rpa2Q62193 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.78■■□□□ 1.08
Rpa2Q62193 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.77■■□□□ 1.08
Rpa2Q62193 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Rpa2Q62193 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpa2Q62193 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.77■■□□□ 1.07
Rpa2Q62193 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpa2Q62193 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.76■■□□□ 1.07
Rpa2Q62193 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpa2Q62193 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpa2Q62193 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpa2Q62193 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpa2Q62193 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Rpa2Q62193 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rpa2Q62193 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rpa2Q62193 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rpa2Q62193 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Rpa2Q62193 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpa2Q62193 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa2Q62193 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.72■■□□□ 1.07
Rpa2Q62193 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa2Q62193 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpa2Q62193 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rpa2Q62193 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpa2Q62193 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpa2Q62193 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rpa2Q62193 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rpa2Q62193 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.69■■□□□ 1.06
Rpa2Q62193 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpa2Q62193 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rpa2Q62193 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpa2Q62193 Gm8503-201ENSMUST00000118131 455 ntBASIC21.68■■□□□ 1.06
Rpa2Q62193 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.68■■□□□ 1.06
Rpa2Q62193 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpa2Q62193 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpa2Q62193 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpa2Q62193 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpa2Q62193 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.67■■□□□ 1.06
Rpa2Q62193 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rpa2Q62193 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpa2Q62193 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rpa2Q62193 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpa2Q62193 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.65■■□□□ 1.06
Rpa2Q62193 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rpa2Q62193 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.65■■□□□ 1.06
Rpa2Q62193 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpa2Q62193 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Rpa2Q62193 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpa2Q62193 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpa2Q62193 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa2Q62193 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa2Q62193 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.59■■□□□ 1.05
Rpa2Q62193 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa2Q62193 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa2Q62193 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms