Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.28■□□□□ 0.36
Foxc1Q61572 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxc1Q61572 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxc1Q61572 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxc1Q61572 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.27■□□□□ 0.36
Foxc1Q61572 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxc1Q61572 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxc1Q61572 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxc1Q61572 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxc1Q61572 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxc1Q61572 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.26■□□□□ 0.35
Foxc1Q61572 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Foxc1Q61572 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxc1Q61572 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.25■□□□□ 0.35
Foxc1Q61572 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.24■□□□□ 0.35
Foxc1Q61572 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxc1Q61572 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Foxc1Q61572 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxc1Q61572 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxc1Q61572 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxc1Q61572 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.24■□□□□ 0.35
Foxc1Q61572 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxc1Q61572 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxc1Q61572 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Foxc1Q61572 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Foxc1Q61572 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxc1Q61572 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Foxc1Q61572 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxc1Q61572 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Foxc1Q61572 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxc1Q61572 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Foxc1Q61572 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxc1Q61572 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Foxc1Q61572 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Foxc1Q61572 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxc1Q61572 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxc1Q61572 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxc1Q61572 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxc1Q61572 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.19■□□□□ 0.34
Foxc1Q61572 Nkain2-201ENSMUST00000092602 558 ntBASIC17.19■□□□□ 0.34
Foxc1Q61572 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Foxc1Q61572 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Foxc1Q61572 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxc1Q61572 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxc1Q61572 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.18■□□□□ 0.34
Foxc1Q61572 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxc1Q61572 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxc1Q61572 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.18■□□□□ 0.34
Foxc1Q61572 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Foxc1Q61572 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxc1Q61572 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxc1Q61572 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxc1Q61572 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxc1Q61572 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxc1Q61572 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Foxc1Q61572 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxc1Q61572 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxc1Q61572 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Foxc1Q61572 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Foxc1Q61572 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.13■□□□□ 0.33
Foxc1Q61572 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.13■□□□□ 0.33
Foxc1Q61572 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.13■□□□□ 0.33
Foxc1Q61572 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.12■□□□□ 0.33
Foxc1Q61572 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Foxc1Q61572 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxc1Q61572 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Foxc1Q61572 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxc1Q61572 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Foxc1Q61572 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxc1Q61572 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxc1Q61572 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Foxc1Q61572 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Foxc1Q61572 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.1■□□□□ 0.33
Foxc1Q61572 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Foxc1Q61572 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.1■□□□□ 0.33
Foxc1Q61572 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Foxc1Q61572 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Foxc1Q61572 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.09■□□□□ 0.33
Foxc1Q61572 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.09■□□□□ 0.33
Foxc1Q61572 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Foxc1Q61572 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxc1Q61572 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxc1Q61572 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.08■□□□□ 0.33
Foxc1Q61572 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxc1Q61572 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Foxc1Q61572 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxc1Q61572 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Foxc1Q61572 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Foxc1Q61572 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxc1Q61572 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxc1Q61572 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxc1Q61572 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxc1Q61572 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Foxc1Q61572 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.06■□□□□ 0.32
Foxc1Q61572 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxc1Q61572 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxc1Q61572 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxc1Q61572 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Foxc1Q61572 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxc1Q61572 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms