Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ddx4Q61496 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx4Q61496 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx4Q61496 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Ddx4Q61496 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Ddx4Q61496 Particl-201ENSMUST00000205370 1560 ntBASIC27.01■■□□□ 1.92
Ddx4Q61496 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.01■■□□□ 1.91
Ddx4Q61496 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ddx4Q61496 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27■■□□□ 1.91
Ddx4Q61496 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ddx4Q61496 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx4Q61496 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
Ddx4Q61496 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.98■■□□□ 1.91
Ddx4Q61496 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ddx4Q61496 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx4Q61496 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx4Q61496 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx4Q61496 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx4Q61496 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ddx4Q61496 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ddx4Q61496 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx4Q61496 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
Ddx4Q61496 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx4Q61496 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx4Q61496 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ddx4Q61496 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ddx4Q61496 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx4Q61496 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx4Q61496 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Ddx4Q61496 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Ddx4Q61496 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx4Q61496 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx4Q61496 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx4Q61496 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
Ddx4Q61496 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ddx4Q61496 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ddx4Q61496 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx4Q61496 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.87■■□□□ 1.89
Ddx4Q61496 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx4Q61496 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx4Q61496 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx4Q61496 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx4Q61496 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ddx4Q61496 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Ddx4Q61496 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.84■■□□□ 1.89
Ddx4Q61496 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ddx4Q61496 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx4Q61496 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx4Q61496 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx4Q61496 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx4Q61496 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx4Q61496 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx4Q61496 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx4Q61496 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx4Q61496 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Ddx4Q61496 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.79■■□□□ 1.88
Ddx4Q61496 Scarna2-201ENSMUST00000157560 414 ntBASIC26.79■■□□□ 1.88
Ddx4Q61496 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx4Q61496 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ddx4Q61496 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx4Q61496 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.77■■□□□ 1.88
Ddx4Q61496 Gm12366-201ENSMUST00000121722 873 ntBASIC26.77■■□□□ 1.88
Ddx4Q61496 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.77■■□□□ 1.88
Ddx4Q61496 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx4Q61496 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.77■■□□□ 1.88
Ddx4Q61496 Gm5786-201ENSMUST00000085368 882 ntBASIC26.77■■□□□ 1.88
Ddx4Q61496 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Ddx4Q61496 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Ddx4Q61496 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx4Q61496 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx4Q61496 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx4Q61496 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx4Q61496 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx4Q61496 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.74■■□□□ 1.87
Ddx4Q61496 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.74■■□□□ 1.87
Ddx4Q61496 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx4Q61496 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Ddx4Q61496 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx4Q61496 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx4Q61496 Gm11687-201ENSMUST00000118911 886 ntBASIC26.73■■□□□ 1.87
Ddx4Q61496 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx4Q61496 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx4Q61496 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.73■■□□□ 1.87
Ddx4Q61496 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx4Q61496 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.72■■□□□ 1.87
Ddx4Q61496 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx4Q61496 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.71■■□□□ 1.87
Ddx4Q61496 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx4Q61496 Gm9806-201ENSMUST00000051080 552 ntBASIC26.7■■□□□ 1.86
Ddx4Q61496 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx4Q61496 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx4Q61496 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx4Q61496 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.67■■□□□ 1.86
Ddx4Q61496 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx4Q61496 Gm4799-201ENSMUST00000095396 657 ntBASIC26.67■■□□□ 1.86
Ddx4Q61496 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.66■■□□□ 1.86
Ddx4Q61496 Gm16437-201ENSMUST00000025669 507 ntBASIC26.66■■□□□ 1.86
Ddx4Q61496 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.65■■□□□ 1.86
Ddx4Q61496 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx4Q61496 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms