Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hcfc1Q61191 Gm30023-201ENSMUST00000197970 889 ntBASIC20.83■□□□□ 0.93
Hcfc1Q61191 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hcfc1Q61191 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hcfc1Q61191 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hcfc1Q61191 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hcfc1Q61191 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcfc1Q61191 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hcfc1Q61191 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcfc1Q61191 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcfc1Q61191 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hcfc1Q61191 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.82■□□□□ 0.92
Hcfc1Q61191 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hcfc1Q61191 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcfc1Q61191 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcfc1Q61191 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcfc1Q61191 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hcfc1Q61191 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcfc1Q61191 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcfc1Q61191 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hcfc1Q61191 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hcfc1Q61191 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Hcfc1Q61191 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Hcfc1Q61191 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hcfc1Q61191 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.76■□□□□ 0.91
Hcfc1Q61191 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hcfc1Q61191 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.75■□□□□ 0.91
Hcfc1Q61191 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hcfc1Q61191 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcfc1Q61191 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcfc1Q61191 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcfc1Q61191 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hcfc1Q61191 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcfc1Q61191 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcfc1Q61191 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcfc1Q61191 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.71■□□□□ 0.91
Hcfc1Q61191 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcfc1Q61191 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.71■□□□□ 0.91
Hcfc1Q61191 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcfc1Q61191 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1Q61191 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1Q61191 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1Q61191 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Hcfc1Q61191 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hcfc1Q61191 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcfc1Q61191 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcfc1Q61191 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcfc1Q61191 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcfc1Q61191 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hcfc1Q61191 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hcfc1Q61191 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hcfc1Q61191 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Hcfc1Q61191 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Hcfc1Q61191 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcfc1Q61191 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcfc1Q61191 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hcfc1Q61191 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.63■□□□□ 0.89
Hcfc1Q61191 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hcfc1Q61191 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1Q61191 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1Q61191 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.62■□□□□ 0.89
Hcfc1Q61191 Gm12366-201ENSMUST00000121722 873 ntBASIC20.62■□□□□ 0.89
Hcfc1Q61191 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.62■□□□□ 0.89
Hcfc1Q61191 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1Q61191 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1Q61191 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.62■□□□□ 0.89
Hcfc1Q61191 Gm5786-201ENSMUST00000085368 882 ntBASIC20.62■□□□□ 0.89
Hcfc1Q61191 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1Q61191 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Hcfc1Q61191 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hcfc1Q61191 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.61■□□□□ 0.89
Hcfc1Q61191 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.61■□□□□ 0.89
Hcfc1Q61191 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.61■□□□□ 0.89
Hcfc1Q61191 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hcfc1Q61191 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcfc1Q61191 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.6■□□□□ 0.89
Hcfc1Q61191 Gm45364-201ENSMUST00000210883 159 ntBASIC20.6■□□□□ 0.89
Hcfc1Q61191 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcfc1Q61191 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.58■□□□□ 0.89
Hcfc1Q61191 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hcfc1Q61191 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.58■□□□□ 0.88
Hcfc1Q61191 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hcfc1Q61191 Gm11687-201ENSMUST00000118911 886 ntBASIC20.58■□□□□ 0.88
Hcfc1Q61191 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.58■□□□□ 0.88
Hcfc1Q61191 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcfc1Q61191 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcfc1Q61191 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hcfc1Q61191 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
Hcfc1Q61191 Scarna2-201ENSMUST00000157560 414 ntBASIC20.56■□□□□ 0.88
Hcfc1Q61191 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1Q61191 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1Q61191 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1Q61191 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1Q61191 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.55■□□□□ 0.88
Hcfc1Q61191 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc1Q61191 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc1Q61191 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.55■□□□□ 0.88
Hcfc1Q61191 Gm9806-201ENSMUST00000051080 552 ntBASIC20.54■□□□□ 0.88
Hcfc1Q61191 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hcfc1Q61191 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms