Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ubr3Q5U430 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ubr3Q5U430 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ubr3Q5U430 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
Ubr3Q5U430 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ubr3Q5U430 Gm30023-201ENSMUST00000197970 889 ntBASIC30.53■■■□□ 2.48
Ubr3Q5U430 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ubr3Q5U430 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Ubr3Q5U430 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Ubr3Q5U430 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Ubr3Q5U430 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Ubr3Q5U430 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ubr3Q5U430 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Ubr3Q5U430 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Ubr3Q5U430 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ubr3Q5U430 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.47■■■□□ 2.47
Ubr3Q5U430 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ubr3Q5U430 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ubr3Q5U430 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ubr3Q5U430 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Ubr3Q5U430 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ubr3Q5U430 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ubr3Q5U430 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.4■■■□□ 2.46
Ubr3Q5U430 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ubr3Q5U430 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Ubr3Q5U430 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ubr3Q5U430 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Ubr3Q5U430 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.38■■■□□ 2.45
Ubr3Q5U430 Gm12366-201ENSMUST00000121722 873 ntBASIC30.38■■■□□ 2.45
Ubr3Q5U430 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.38■■■□□ 2.45
Ubr3Q5U430 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.38■■■□□ 2.45
Ubr3Q5U430 Gm5786-201ENSMUST00000085368 882 ntBASIC30.38■■■□□ 2.45
Ubr3Q5U430 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Ubr3Q5U430 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ubr3Q5U430 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.36■■■□□ 2.45
Ubr3Q5U430 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ubr3Q5U430 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Ubr3Q5U430 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ubr3Q5U430 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ubr3Q5U430 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ubr3Q5U430 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.33■■■□□ 2.45
Ubr3Q5U430 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30.32■■■□□ 2.44
Ubr3Q5U430 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ubr3Q5U430 Scarna2-201ENSMUST00000157560 414 ntBASIC30.3■■■□□ 2.44
Ubr3Q5U430 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ubr3Q5U430 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ubr3Q5U430 Gm4799-201ENSMUST00000095396 657 ntBASIC30.29■■■□□ 2.44
Ubr3Q5U430 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ubr3Q5U430 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ubr3Q5U430 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ubr3Q5U430 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.26■■■□□ 2.43
Ubr3Q5U430 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ubr3Q5U430 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ubr3Q5U430 Gm11687-201ENSMUST00000118911 886 ntBASIC30.25■■■□□ 2.43
Ubr3Q5U430 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ubr3Q5U430 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
Ubr3Q5U430 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.25■■■□□ 2.43
Ubr3Q5U430 Gm9806-201ENSMUST00000051080 552 ntBASIC30.25■■■□□ 2.43
Ubr3Q5U430 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ubr3Q5U430 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.23■■■□□ 2.43
Ubr3Q5U430 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ubr3Q5U430 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ubr3Q5U430 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Ubr3Q5U430 Gm45364-201ENSMUST00000210883 159 ntBASIC30.22■■■□□ 2.43
Ubr3Q5U430 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.22■■■□□ 2.43
Ubr3Q5U430 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ubr3Q5U430 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ubr3Q5U430 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.18■■■□□ 2.42
Ubr3Q5U430 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ubr3Q5U430 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.18■■■□□ 2.42
Ubr3Q5U430 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.17■■■□□ 2.42
Ubr3Q5U430 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.16■■■□□ 2.42
Ubr3Q5U430 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ubr3Q5U430 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ubr3Q5U430 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ubr3Q5U430 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Ubr3Q5U430 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ubr3Q5U430 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC30.14■■■□□ 2.42
Ubr3Q5U430 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ubr3Q5U430 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ubr3Q5U430 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Ubr3Q5U430 Gm27502-201ENSMUST00000183495 199 ntBASIC30.12■■■□□ 2.41
Ubr3Q5U430 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ubr3Q5U430 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ubr3Q5U430 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ubr3Q5U430 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.12■■■□□ 2.41
Ubr3Q5U430 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Ubr3Q5U430 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.12■■■□□ 2.41
Ubr3Q5U430 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ubr3Q5U430 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ubr3Q5U430 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Ubr3Q5U430 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ubr3Q5U430 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ubr3Q5U430 Gm16437-201ENSMUST00000025669 507 ntBASIC30.09■■■□□ 2.41
Ubr3Q5U430 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
Ubr3Q5U430 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ubr3Q5U430 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ubr3Q5U430 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ubr3Q5U430 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.06■■■□□ 2.4
Ubr3Q5U430 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms