Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r223Q5SSA0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r223Q5SSA0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r223Q5SSA0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vmn1r223Q5SSA0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vmn1r223Q5SSA0 Gm9397-201ENSMUST00000200125 605 ntBASIC20.64■□□□□ 0.89
Vmn1r223Q5SSA0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Vmn1r223Q5SSA0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r223Q5SSA0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r223Q5SSA0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r223Q5SSA0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r223Q5SSA0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.63■□□□□ 0.89
Vmn1r223Q5SSA0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.62■□□□□ 0.89
Vmn1r223Q5SSA0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Vmn1r223Q5SSA0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r223Q5SSA0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vmn1r223Q5SSA0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.61■□□□□ 0.89
Vmn1r223Q5SSA0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vmn1r223Q5SSA0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vmn1r223Q5SSA0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r223Q5SSA0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r223Q5SSA0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r223Q5SSA0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r223Q5SSA0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r223Q5SSA0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.58■□□□□ 0.89
Vmn1r223Q5SSA0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.58■□□□□ 0.88
Vmn1r223Q5SSA0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Vmn1r223Q5SSA0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vmn1r223Q5SSA0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vmn1r223Q5SSA0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r223Q5SSA0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r223Q5SSA0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r223Q5SSA0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r223Q5SSA0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r223Q5SSA0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r223Q5SSA0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.55■□□□□ 0.88
Vmn1r223Q5SSA0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.55■□□□□ 0.88
Vmn1r223Q5SSA0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.53■□□□□ 0.88
Vmn1r223Q5SSA0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r223Q5SSA0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r223Q5SSA0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r223Q5SSA0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Vmn1r223Q5SSA0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.53■□□□□ 0.88
Vmn1r223Q5SSA0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r223Q5SSA0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r223Q5SSA0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vmn1r223Q5SSA0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.51■□□□□ 0.87
Vmn1r223Q5SSA0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r223Q5SSA0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r223Q5SSA0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r223Q5SSA0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r223Q5SSA0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Vmn1r223Q5SSA0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.49■□□□□ 0.87
Vmn1r223Q5SSA0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r223Q5SSA0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Vmn1r223Q5SSA0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r223Q5SSA0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r223Q5SSA0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r223Q5SSA0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r223Q5SSA0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r223Q5SSA0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.46■□□□□ 0.87
Vmn1r223Q5SSA0 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.46■□□□□ 0.87
Vmn1r223Q5SSA0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.46■□□□□ 0.87
Vmn1r223Q5SSA0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vmn1r223Q5SSA0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r223Q5SSA0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r223Q5SSA0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vmn1r223Q5SSA0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r223Q5SSA0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r223Q5SSA0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r223Q5SSA0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r223Q5SSA0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r223Q5SSA0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r223Q5SSA0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.43■□□□□ 0.86
Vmn1r223Q5SSA0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r223Q5SSA0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r223Q5SSA0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r223Q5SSA0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Vmn1r223Q5SSA0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Vmn1r223Q5SSA0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r223Q5SSA0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.41■□□□□ 0.86
Vmn1r223Q5SSA0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r223Q5SSA0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r223Q5SSA0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r223Q5SSA0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Vmn1r223Q5SSA0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Vmn1r223Q5SSA0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vmn1r223Q5SSA0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vmn1r223Q5SSA0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r223Q5SSA0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms