Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtl6Q505G4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl6Q505G4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl6Q505G4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
Rtl6Q505G4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtl6Q505G4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl6Q505G4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtl6Q505G4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtl6Q505G4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.32■□□□□ 0.84
Rtl6Q505G4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.31■□□□□ 0.84
Rtl6Q505G4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.31■□□□□ 0.84
Rtl6Q505G4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl6Q505G4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl6Q505G4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.29■□□□□ 0.84
Rtl6Q505G4 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.29■□□□□ 0.84
Rtl6Q505G4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.29■□□□□ 0.84
Rtl6Q505G4 Amer2-203ENSMUST00000225247 2662 ntBASIC20.29■□□□□ 0.84
Rtl6Q505G4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl6Q505G4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl6Q505G4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.27■□□□□ 0.84
Rtl6Q505G4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.27■□□□□ 0.83
Rtl6Q505G4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rtl6Q505G4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Rtl6Q505G4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl6Q505G4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl6Q505G4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl6Q505G4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtl6Q505G4 Gm30023-201ENSMUST00000197970 889 ntBASIC20.23■□□□□ 0.83
Rtl6Q505G4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl6Q505G4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl6Q505G4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.21■□□□□ 0.83
Rtl6Q505G4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl6Q505G4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rtl6Q505G4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.21■□□□□ 0.83
Rtl6Q505G4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtl6Q505G4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Rtl6Q505G4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtl6Q505G4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl6Q505G4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl6Q505G4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl6Q505G4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtl6Q505G4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl6Q505G4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtl6Q505G4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.18■□□□□ 0.82
Rtl6Q505G4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl6Q505G4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl6Q505G4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.17■□□□□ 0.82
Rtl6Q505G4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rtl6Q505G4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl6Q505G4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl6Q505G4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rtl6Q505G4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtl6Q505G4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtl6Q505G4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtl6Q505G4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.15■□□□□ 0.82
Rtl6Q505G4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtl6Q505G4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Rtl6Q505G4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl6Q505G4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtl6Q505G4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.14■□□□□ 0.81
Rtl6Q505G4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl6Q505G4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtl6Q505G4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtl6Q505G4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl6Q505G4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl6Q505G4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtl6Q505G4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rtl6Q505G4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rtl6Q505G4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.11■□□□□ 0.81
Rtl6Q505G4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtl6Q505G4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl6Q505G4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rtl6Q505G4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl6Q505G4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rtl6Q505G4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl6Q505G4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rtl6Q505G4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.09■□□□□ 0.81
Rtl6Q505G4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Rtl6Q505G4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.08■□□□□ 0.8
Rtl6Q505G4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rtl6Q505G4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.07■□□□□ 0.8
Rtl6Q505G4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl6Q505G4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rtl6Q505G4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl6Q505G4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl6Q505G4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.06■□□□□ 0.8
Rtl6Q505G4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl6Q505G4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtl6Q505G4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl6Q505G4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl6Q505G4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtl6Q505G4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rtl6Q505G4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtl6Q505G4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtl6Q505G4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rtl6Q505G4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl6Q505G4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl6Q505G4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl6Q505G4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rtl6Q505G4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms