Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim9Q3V0X1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim9Q3V0X1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim9Q3V0X1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim9Q3V0X1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.29■□□□□ 0.52
Smim9Q3V0X1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smim9Q3V0X1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim9Q3V0X1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim9Q3V0X1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smim9Q3V0X1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim9Q3V0X1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim9Q3V0X1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim9Q3V0X1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Smim9Q3V0X1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smim9Q3V0X1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smim9Q3V0X1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim9Q3V0X1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim9Q3V0X1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Smim9Q3V0X1 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.25■□□□□ 0.51
Smim9Q3V0X1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim9Q3V0X1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim9Q3V0X1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim9Q3V0X1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Smim9Q3V0X1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.24■□□□□ 0.51
Smim9Q3V0X1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim9Q3V0X1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim9Q3V0X1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim9Q3V0X1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Smim9Q3V0X1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smim9Q3V0X1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim9Q3V0X1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim9Q3V0X1 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.21■□□□□ 0.51
Smim9Q3V0X1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim9Q3V0X1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smim9Q3V0X1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smim9Q3V0X1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim9Q3V0X1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim9Q3V0X1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smim9Q3V0X1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smim9Q3V0X1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.2■□□□□ 0.5
Smim9Q3V0X1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.19■□□□□ 0.5
Smim9Q3V0X1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smim9Q3V0X1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Smim9Q3V0X1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim9Q3V0X1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smim9Q3V0X1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim9Q3V0X1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim9Q3V0X1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim9Q3V0X1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim9Q3V0X1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim9Q3V0X1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim9Q3V0X1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim9Q3V0X1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim9Q3V0X1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim9Q3V0X1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smim9Q3V0X1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim9Q3V0X1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim9Q3V0X1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim9Q3V0X1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smim9Q3V0X1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim9Q3V0X1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim9Q3V0X1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smim9Q3V0X1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smim9Q3V0X1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Smim9Q3V0X1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smim9Q3V0X1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.14■□□□□ 0.49
Smim9Q3V0X1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim9Q3V0X1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim9Q3V0X1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim9Q3V0X1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smim9Q3V0X1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smim9Q3V0X1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim9Q3V0X1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim9Q3V0X1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.13■□□□□ 0.49
Smim9Q3V0X1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smim9Q3V0X1 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.12■□□□□ 0.49
Smim9Q3V0X1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim9Q3V0X1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim9Q3V0X1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim9Q3V0X1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smim9Q3V0X1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Smim9Q3V0X1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smim9Q3V0X1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smim9Q3V0X1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim9Q3V0X1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smim9Q3V0X1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim9Q3V0X1 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.1■□□□□ 0.49
Smim9Q3V0X1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Smim9Q3V0X1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim9Q3V0X1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smim9Q3V0X1 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.09■□□□□ 0.49
Smim9Q3V0X1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.09■□□□□ 0.49
Smim9Q3V0X1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smim9Q3V0X1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Smim9Q3V0X1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smim9Q3V0X1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Smim9Q3V0X1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smim9Q3V0X1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smim9Q3V0X1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smim9Q3V0X1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms