Protein–RNA interactions for Protein: Q3UMW8

Cln5, Ceroid-lipofuscinosis neuronal protein 5 homolog, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln5Q3UMW8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln5Q3UMW8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cln5Q3UMW8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cln5Q3UMW8 Gm6821-201ENSMUST00000107540 542 ntBASIC20.93■□□□□ 0.94
Cln5Q3UMW8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.93■□□□□ 0.94
Cln5Q3UMW8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.93■□□□□ 0.94
Cln5Q3UMW8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cln5Q3UMW8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.92■□□□□ 0.94
Cln5Q3UMW8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cln5Q3UMW8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cln5Q3UMW8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.9■□□□□ 0.94
Cln5Q3UMW8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cln5Q3UMW8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.89■□□□□ 0.93
Cln5Q3UMW8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cln5Q3UMW8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cln5Q3UMW8 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.88■□□□□ 0.93
Cln5Q3UMW8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cln5Q3UMW8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cln5Q3UMW8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cln5Q3UMW8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Cln5Q3UMW8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.87■□□□□ 0.93
Cln5Q3UMW8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.87■□□□□ 0.93
Cln5Q3UMW8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cln5Q3UMW8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cln5Q3UMW8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cln5Q3UMW8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cln5Q3UMW8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cln5Q3UMW8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.83■□□□□ 0.93
Cln5Q3UMW8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.83■□□□□ 0.93
Cln5Q3UMW8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cln5Q3UMW8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cln5Q3UMW8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.81■□□□□ 0.92
Cln5Q3UMW8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cln5Q3UMW8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cln5Q3UMW8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cln5Q3UMW8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cln5Q3UMW8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cln5Q3UMW8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cln5Q3UMW8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cln5Q3UMW8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cln5Q3UMW8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cln5Q3UMW8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cln5Q3UMW8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cln5Q3UMW8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cln5Q3UMW8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.77■□□□□ 0.92
Cln5Q3UMW8 Gm30023-201ENSMUST00000197970 889 ntBASIC20.77■□□□□ 0.92
Cln5Q3UMW8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.77■□□□□ 0.92
Cln5Q3UMW8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cln5Q3UMW8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cln5Q3UMW8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Cln5Q3UMW8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.75■□□□□ 0.91
Cln5Q3UMW8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.75■□□□□ 0.91
Cln5Q3UMW8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cln5Q3UMW8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cln5Q3UMW8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.74■□□□□ 0.91
Cln5Q3UMW8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cln5Q3UMW8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cln5Q3UMW8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cln5Q3UMW8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cln5Q3UMW8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cln5Q3UMW8 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.73■□□□□ 0.91
Cln5Q3UMW8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cln5Q3UMW8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cln5Q3UMW8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cln5Q3UMW8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cln5Q3UMW8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.71■□□□□ 0.91
Cln5Q3UMW8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cln5Q3UMW8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cln5Q3UMW8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.7■□□□□ 0.9
Cln5Q3UMW8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cln5Q3UMW8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cln5Q3UMW8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cln5Q3UMW8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.69■□□□□ 0.9
Cln5Q3UMW8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cln5Q3UMW8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.67■□□□□ 0.9
Cln5Q3UMW8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cln5Q3UMW8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cln5Q3UMW8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cln5Q3UMW8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cln5Q3UMW8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.66■□□□□ 0.9
Cln5Q3UMW8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cln5Q3UMW8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cln5Q3UMW8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.66■□□□□ 0.9
Cln5Q3UMW8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cln5Q3UMW8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cln5Q3UMW8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cln5Q3UMW8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cln5Q3UMW8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Cln5Q3UMW8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cln5Q3UMW8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cln5Q3UMW8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.62■□□□□ 0.89
Cln5Q3UMW8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cln5Q3UMW8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cln5Q3UMW8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.61■□□□□ 0.89
Cln5Q3UMW8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cln5Q3UMW8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cln5Q3UMW8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cln5Q3UMW8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cln5Q3UMW8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cln5Q3UMW8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms