Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Lins1Q3U1D0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.8■■■□□ 2.2
Lins1Q3U1D0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Lins1Q3U1D0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.78■■■□□ 2.2
Lins1Q3U1D0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Lins1Q3U1D0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Lins1Q3U1D0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Lins1Q3U1D0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
Lins1Q3U1D0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
Lins1Q3U1D0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.76■■■□□ 2.19
Lins1Q3U1D0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Lins1Q3U1D0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.75■■■□□ 2.19
Lins1Q3U1D0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Lins1Q3U1D0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Lins1Q3U1D0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Lins1Q3U1D0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Lins1Q3U1D0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.72■■■□□ 2.19
Lins1Q3U1D0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Lins1Q3U1D0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Lins1Q3U1D0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Lins1Q3U1D0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Lins1Q3U1D0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.7■■■□□ 2.18
Lins1Q3U1D0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Lins1Q3U1D0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
Lins1Q3U1D0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Lins1Q3U1D0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.68■■■□□ 2.18
Lins1Q3U1D0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Lins1Q3U1D0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Lins1Q3U1D0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Lins1Q3U1D0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Lins1Q3U1D0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Lins1Q3U1D0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Lins1Q3U1D0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.65■■■□□ 2.18
Lins1Q3U1D0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Lins1Q3U1D0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Lins1Q3U1D0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
Lins1Q3U1D0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Lins1Q3U1D0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Lins1Q3U1D0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Lins1Q3U1D0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.62■■■□□ 2.17
Lins1Q3U1D0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.6■■■□□ 2.17
Lins1Q3U1D0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Lins1Q3U1D0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Lins1Q3U1D0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.6■■■□□ 2.17
Lins1Q3U1D0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Lins1Q3U1D0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Lins1Q3U1D0 Gm30023-201ENSMUST00000197970 889 ntBASIC28.59■■■□□ 2.17
Lins1Q3U1D0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Lins1Q3U1D0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.59■■■□□ 2.17
Lins1Q3U1D0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Lins1Q3U1D0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Lins1Q3U1D0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.59■■■□□ 2.17
Lins1Q3U1D0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.58■■■□□ 2.17
Lins1Q3U1D0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Lins1Q3U1D0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Lins1Q3U1D0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Lins1Q3U1D0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.57■■■□□ 2.16
Lins1Q3U1D0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Lins1Q3U1D0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Lins1Q3U1D0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.55■■■□□ 2.16
Lins1Q3U1D0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.55■■■□□ 2.16
Lins1Q3U1D0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Lins1Q3U1D0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.53■■■□□ 2.16
Lins1Q3U1D0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lins1Q3U1D0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Lins1Q3U1D0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Lins1Q3U1D0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.5■■■□□ 2.15
Lins1Q3U1D0 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.5■■■□□ 2.15
Lins1Q3U1D0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Lins1Q3U1D0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Lins1Q3U1D0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Lins1Q3U1D0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lins1Q3U1D0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Lins1Q3U1D0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.47■■■□□ 2.15
Lins1Q3U1D0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Lins1Q3U1D0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.47■■■□□ 2.15
Lins1Q3U1D0 Gm11175-201ENSMUST00000116172 543 ntBASIC28.46■■■□□ 2.15
Lins1Q3U1D0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Lins1Q3U1D0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.45■■■□□ 2.14
Lins1Q3U1D0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Lins1Q3U1D0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Lins1Q3U1D0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.44■■■□□ 2.14
Lins1Q3U1D0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Lins1Q3U1D0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Lins1Q3U1D0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Lins1Q3U1D0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Lins1Q3U1D0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Lins1Q3U1D0 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.42■■■□□ 2.14
Lins1Q3U1D0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
Lins1Q3U1D0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Lins1Q3U1D0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Lins1Q3U1D0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Lins1Q3U1D0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Lins1Q3U1D0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Lins1Q3U1D0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Lins1Q3U1D0 Particl-201ENSMUST00000205370 1560 ntBASIC28.4■■■□□ 2.14
Lins1Q3U1D0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Lins1Q3U1D0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Lins1Q3U1D0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Lins1Q3U1D0 Mir6538-201ENSMUST00000183713 110 ntBASIC28.38■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms