Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
Trpm1Q2TV84 Gm30023-201ENSMUST00000197970 889 ntBASIC35.78■■■■□ 3.32
Trpm1Q2TV84 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC35.76■■■■□ 3.31
Trpm1Q2TV84 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Trpm1Q2TV84 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Trpm1Q2TV84 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC35.75■■■■□ 3.31
Trpm1Q2TV84 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Trpm1Q2TV84 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
Trpm1Q2TV84 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Trpm1Q2TV84 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
Trpm1Q2TV84 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Trpm1Q2TV84 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
Trpm1Q2TV84 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Trpm1Q2TV84 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC35.71■■■■□ 3.31
Trpm1Q2TV84 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC35.71■■■■□ 3.31
Trpm1Q2TV84 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
Trpm1Q2TV84 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC35.69■■■■□ 3.3
Trpm1Q2TV84 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Trpm1Q2TV84 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC35.67■■■■□ 3.3
Trpm1Q2TV84 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Trpm1Q2TV84 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Trpm1Q2TV84 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
Trpm1Q2TV84 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
Trpm1Q2TV84 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Trpm1Q2TV84 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC35.63■■■■□ 3.29
Trpm1Q2TV84 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC35.61■■■■□ 3.29
Trpm1Q2TV84 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC35.61■■■■□ 3.29
Trpm1Q2TV84 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Trpm1Q2TV84 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
Trpm1Q2TV84 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC35.59■■■■□ 3.29
Trpm1Q2TV84 Gm12366-201ENSMUST00000121722 873 ntBASIC35.59■■■■□ 3.29
Trpm1Q2TV84 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC35.59■■■■□ 3.29
Trpm1Q2TV84 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Trpm1Q2TV84 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Trpm1Q2TV84 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC35.59■■■■□ 3.29
Trpm1Q2TV84 Gm5786-201ENSMUST00000085368 882 ntBASIC35.59■■■■□ 3.29
Trpm1Q2TV84 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
Trpm1Q2TV84 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
Trpm1Q2TV84 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC35.55■■■■□ 3.28
Trpm1Q2TV84 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Trpm1Q2TV84 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC35.54■■■■□ 3.28
Trpm1Q2TV84 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Trpm1Q2TV84 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Trpm1Q2TV84 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC35.52■■■■□ 3.28
Trpm1Q2TV84 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Trpm1Q2TV84 Gm4799-201ENSMUST00000095396 657 ntBASIC35.52■■■■□ 3.28
Trpm1Q2TV84 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC35.51■■■■□ 3.28
Trpm1Q2TV84 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
Trpm1Q2TV84 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Trpm1Q2TV84 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC35.5■■■■□ 3.27
Trpm1Q2TV84 Scarna2-201ENSMUST00000157560 414 ntBASIC35.5■■■■□ 3.27
Trpm1Q2TV84 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Trpm1Q2TV84 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC35.5■■■■□ 3.27
Trpm1Q2TV84 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC35.49■■■■□ 3.27
Trpm1Q2TV84 Gm9806-201ENSMUST00000051080 552 ntBASIC35.49■■■■□ 3.27
Trpm1Q2TV84 Gm11687-201ENSMUST00000118911 886 ntBASIC35.48■■■■□ 3.27
Trpm1Q2TV84 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Trpm1Q2TV84 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC35.44■■■■□ 3.26
Trpm1Q2TV84 Gm45364-201ENSMUST00000210883 159 ntBASIC35.43■■■■□ 3.26
Trpm1Q2TV84 Pkd1-207ENSMUST00000228550 1050 ntBASIC35.42■■■■□ 3.26
Trpm1Q2TV84 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC35.41■■■■□ 3.26
Trpm1Q2TV84 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC35.4■■■■□ 3.26
Trpm1Q2TV84 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Trpm1Q2TV84 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Trpm1Q2TV84 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC35.38■■■■□ 3.25
Trpm1Q2TV84 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Trpm1Q2TV84 AC154454.1-201ENSMUST00000225253 216 ntBASIC35.37■■■■□ 3.25
Trpm1Q2TV84 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Trpm1Q2TV84 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC35.37■■■■□ 3.25
Trpm1Q2TV84 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Trpm1Q2TV84 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Trpm1Q2TV84 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC35.36■■■■□ 3.25
Trpm1Q2TV84 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Trpm1Q2TV84 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
Trpm1Q2TV84 Pcf11-205ENSMUST00000208255 1720 ntBASIC35.34■■■■□ 3.25
Trpm1Q2TV84 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Trpm1Q2TV84 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Trpm1Q2TV84 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Trpm1Q2TV84 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC35.32■■■■□ 3.25
Trpm1Q2TV84 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Trpm1Q2TV84 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
Trpm1Q2TV84 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC35.31■■■■□ 3.24
Trpm1Q2TV84 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC35.31■■■■□ 3.24
Trpm1Q2TV84 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Trpm1Q2TV84 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC35.31■■■■□ 3.24
Trpm1Q2TV84 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Trpm1Q2TV84 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC35.3■■■■□ 3.24
Trpm1Q2TV84 Gm27502-201ENSMUST00000183495 199 ntBASIC35.3■■■■□ 3.24
Trpm1Q2TV84 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC35.3■■■■□ 3.24
Trpm1Q2TV84 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC35.3■■■■□ 3.24
Trpm1Q2TV84 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Trpm1Q2TV84 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC35.29■■■■□ 3.24
Trpm1Q2TV84 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC35.29■■■■□ 3.24
Trpm1Q2TV84 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC35.28■■■■□ 3.24
Trpm1Q2TV84 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Trpm1Q2TV84 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Trpm1Q2TV84 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC35.25■■■■□ 3.23
Trpm1Q2TV84 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC35.25■■■■□ 3.23
Trpm1Q2TV84 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Trpm1Q2TV84 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms