Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim72Q1XH17 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim72Q1XH17 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trim72Q1XH17 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim72Q1XH17 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim72Q1XH17 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim72Q1XH17 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Trim72Q1XH17 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.59■■□□□ 1.69
Trim72Q1XH17 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim72Q1XH17 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.58■■□□□ 1.69
Trim72Q1XH17 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim72Q1XH17 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.57■■□□□ 1.68
Trim72Q1XH17 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim72Q1XH17 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.56■■□□□ 1.68
Trim72Q1XH17 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim72Q1XH17 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim72Q1XH17 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.56■■□□□ 1.68
Trim72Q1XH17 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
Trim72Q1XH17 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim72Q1XH17 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.54■■□□□ 1.68
Trim72Q1XH17 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim72Q1XH17 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim72Q1XH17 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim72Q1XH17 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim72Q1XH17 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim72Q1XH17 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Trim72Q1XH17 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim72Q1XH17 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim72Q1XH17 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim72Q1XH17 Gm30023-201ENSMUST00000197970 889 ntBASIC25.5■■□□□ 1.67
Trim72Q1XH17 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim72Q1XH17 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.5■■□□□ 1.67
Trim72Q1XH17 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Trim72Q1XH17 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim72Q1XH17 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Trim72Q1XH17 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.47■■□□□ 1.67
Trim72Q1XH17 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trim72Q1XH17 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim72Q1XH17 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Trim72Q1XH17 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim72Q1XH17 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
Trim72Q1XH17 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.44■■□□□ 1.66
Trim72Q1XH17 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
Trim72Q1XH17 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Trim72Q1XH17 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.43■■□□□ 1.66
Trim72Q1XH17 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.43■■□□□ 1.66
Trim72Q1XH17 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Trim72Q1XH17 Nkain2-201ENSMUST00000092602 558 ntBASIC25.42■■□□□ 1.66
Trim72Q1XH17 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Trim72Q1XH17 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Trim72Q1XH17 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Trim72Q1XH17 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim72Q1XH17 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim72Q1XH17 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trim72Q1XH17 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Trim72Q1XH17 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Trim72Q1XH17 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim72Q1XH17 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Trim72Q1XH17 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Trim72Q1XH17 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
Trim72Q1XH17 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim72Q1XH17 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Trim72Q1XH17 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.37■■□□□ 1.65
Trim72Q1XH17 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim72Q1XH17 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Trim72Q1XH17 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim72Q1XH17 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Trim72Q1XH17 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim72Q1XH17 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.34■■□□□ 1.65
Trim72Q1XH17 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim72Q1XH17 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim72Q1XH17 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.33■■□□□ 1.65
Trim72Q1XH17 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Trim72Q1XH17 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
Trim72Q1XH17 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.32■■□□□ 1.64
Trim72Q1XH17 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim72Q1XH17 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim72Q1XH17 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Trim72Q1XH17 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim72Q1XH17 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim72Q1XH17 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Trim72Q1XH17 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Trim72Q1XH17 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim72Q1XH17 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Trim72Q1XH17 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim72Q1XH17 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Trim72Q1XH17 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Trim72Q1XH17 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Trim72Q1XH17 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim72Q1XH17 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms