Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim72Q1XH17 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim72Q1XH17 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trim72Q1XH17 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim72Q1XH17 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim72Q1XH17 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim72Q1XH17 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Trim72Q1XH17 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.59■■□□□ 1.69
Trim72Q1XH17 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim72Q1XH17 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.58■■□□□ 1.69
Trim72Q1XH17 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim72Q1XH17 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.57■■□□□ 1.68
Trim72Q1XH17 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim72Q1XH17 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.56■■□□□ 1.68
Trim72Q1XH17 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim72Q1XH17 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim72Q1XH17 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.56■■□□□ 1.68
Trim72Q1XH17 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
Trim72Q1XH17 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim72Q1XH17 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.54■■□□□ 1.68
Trim72Q1XH17 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim72Q1XH17 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim72Q1XH17 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim72Q1XH17 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim72Q1XH17 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim72Q1XH17 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Trim72Q1XH17 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim72Q1XH17 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim72Q1XH17 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim72Q1XH17 Gm30023-201ENSMUST00000197970 889 ntBASIC25.5■■□□□ 1.67
Trim72Q1XH17 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim72Q1XH17 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.5■■□□□ 1.67
Trim72Q1XH17 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim72Q1XH17 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Trim72Q1XH17 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim72Q1XH17 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Trim72Q1XH17 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.47■■□□□ 1.67
Trim72Q1XH17 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trim72Q1XH17 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim72Q1XH17 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Trim72Q1XH17 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim72Q1XH17 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
Trim72Q1XH17 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.44■■□□□ 1.66
Trim72Q1XH17 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
Trim72Q1XH17 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Trim72Q1XH17 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.43■■□□□ 1.66
Trim72Q1XH17 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.43■■□□□ 1.66
Trim72Q1XH17 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Trim72Q1XH17 Nkain2-201ENSMUST00000092602 558 ntBASIC25.42■■□□□ 1.66
Trim72Q1XH17 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Trim72Q1XH17 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Trim72Q1XH17 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Trim72Q1XH17 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim72Q1XH17 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim72Q1XH17 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trim72Q1XH17 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Trim72Q1XH17 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Trim72Q1XH17 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim72Q1XH17 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Trim72Q1XH17 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Trim72Q1XH17 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
Trim72Q1XH17 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim72Q1XH17 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Trim72Q1XH17 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.37■■□□□ 1.65
Trim72Q1XH17 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim72Q1XH17 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Trim72Q1XH17 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim72Q1XH17 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Trim72Q1XH17 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim72Q1XH17 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.34■■□□□ 1.65
Trim72Q1XH17 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim72Q1XH17 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim72Q1XH17 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.33■■□□□ 1.65
Trim72Q1XH17 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Trim72Q1XH17 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
Trim72Q1XH17 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.32■■□□□ 1.64
Trim72Q1XH17 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim72Q1XH17 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim72Q1XH17 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Trim72Q1XH17 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim72Q1XH17 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim72Q1XH17 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Trim72Q1XH17 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.29■■□□□ 1.64
Trim72Q1XH17 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Trim72Q1XH17 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim72Q1XH17 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Trim72Q1XH17 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim72Q1XH17 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Trim72Q1XH17 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Trim72Q1XH17 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Trim72Q1XH17 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim72Q1XH17 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms