Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 SRP54YPR088C 1626 nt9.06□□□□□ -0.96
VPS38Q05919 HBS1YKR084C 1836 nt9.05□□□□□ -0.96
VPS38Q05919 ESS1YJR017C 513 nt9.05□□□□□ -0.96
VPS38Q05919 MRS4YKR052C 915 nt9.03□□□□□ -0.96
VPS38Q05919 SRM1YGL097W 1449 nt9.03□□□□□ -0.96
VPS38Q05919 GAS1YMR307W 1680 nt9.01□□□□□ -0.97
VPS38Q05919 NIF3YGL221C 867 nt9.01□□□□□ -0.97
VPS38Q05919 REX2YLR059C 810 nt9□□□□□ -0.97
VPS38Q05919 SPE2YOL052C 1191 nt9□□□□□ -0.97
VPS38Q05919 PTC6YCR079W 1329 nt9□□□□□ -0.97
VPS38Q05919 TPN1YGL186C 1740 nt9□□□□□ -0.97
VPS38Q05919 DUR3YHL016C 2208 nt8.99□□□□□ -0.97
VPS38Q05919 ORT1YOR130C 879 nt8.99□□□□□ -0.97
VPS38Q05919 YLR072WYLR072W 2082 nt8.98□□□□□ -0.97
VPS38Q05919 APS2YJR058C 444 nt8.98□□□□□ -0.97
VPS38Q05919 AAC3YBR085W 924 nt8.98□□□□□ -0.97
VPS38Q05919 TUB4YLR212C 1422 nt8.96□□□□□ -0.98
VPS38Q05919 snR86snR86 1004 nt8.95□□□□□ -0.98
VPS38Q05919 KRE1YNL322C 942 nt8.95□□□□□ -0.98
VPS38Q05919 YMR210WYMR210W 1350 nt8.95□□□□□ -0.98
VPS38Q05919 ESBP6YNL125C 2022 nt8.94□□□□□ -0.98
VPS38Q05919 GSF2YML048W 1212 nt8.94□□□□□ -0.98
VPS38Q05919 FTH1YBR207W 1398 nt8.94□□□□□ -0.98
VPS38Q05919 NAS2YIL007C 663 nt8.93□□□□□ -0.98
VPS38Q05919 NPP1YCR026C 2229 nt8.93□□□□□ -0.98
VPS38Q05919 YPT11YNL304W 1254 nt8.92□□□□□ -0.98
VPS38Q05919 STE4YOR212W 1272 nt8.92□□□□□ -0.98
VPS38Q05919 snR4snR4 186 nt8.92□□□□□ -0.98
VPS38Q05919 URA8YJR103W 1737 nt8.91□□□□□ -0.98
VPS38Q05919 THP3YPR045C 1413 nt8.91□□□□□ -0.98
VPS38Q05919 LEA1YPL213W 717 nt8.91□□□□□ -0.98
VPS38Q05919 MDL2YPL270W 2322 nt8.91□□□□□ -0.98
VPS38Q05919 TMS1YDR105C 1422 nt8.9□□□□□ -0.98
VPS38Q05919 YKR012CYKR012C 378 nt8.9□□□□□ -0.98
VPS38Q05919 CPD1YGR247W 720 nt8.89□□□□□ -0.99
VPS38Q05919 FSH2YMR222C 672 nt8.88□□□□□ -0.99
VPS38Q05919 ABP1YCR088W 1779 nt8.87□□□□□ -0.99
VPS38Q05919 YJL009WYJL009W 327 nt8.87□□□□□ -0.99
VPS38Q05919 YLR349WYLR349W 507 nt8.87□□□□□ -0.99
VPS38Q05919 CDD1YLR245C 429 nt8.86□□□□□ -0.99
VPS38Q05919 DUS3YLR401C 2007 nt8.85□□□□□ -0.99
VPS38Q05919 SDS24YBR214W 1584 nt8.85□□□□□ -0.99
VPS38Q05919 HIS3YOR202W 663 nt8.84□□□□□ -0.99
VPS38Q05919 MEP1YGR121C 1479 nt8.83□□□□□ -1
VPS38Q05919 YJR149WYJR149W 1215 nt8.83□□□□□ -1
VPS38Q05919 VBA3YCL069W 1377 nt8.83□□□□□ -1
VPS38Q05919 YBR056WYBR056W 1506 nt8.82□□□□□ -1
VPS38Q05919 PAR32YDL173W 888 nt8.82□□□□□ -1
VPS38Q05919 LYS20YDL182W 1287 nt8.81□□□□□ -1
VPS38Q05919 ADH3YMR083W 1128 nt8.8□□□□□ -1
VPS38Q05919 POP2YNR052C 1302 nt8.8□□□□□ -1
VPS38Q05919 ILV2YMR108W 2064 nt8.79□□□□□ -1
VPS38Q05919 ADE16YLR028C 1776 nt8.79□□□□□ -1
VPS38Q05919 PHB2YGR231C 933 nt8.79□□□□□ -1
VPS38Q05919 RSM7YJR113C 744 nt8.79□□□□□ -1
VPS38Q05919 DTR1YBR180W 1719 nt8.79□□□□□ -1
VPS38Q05919 DIA4YHR011W 1341 nt8.79□□□□□ -1
VPS38Q05919 FIT1YDR534C 1587 nt8.78□□□□□ -1
VPS38Q05919 YIR035CYIR035C 765 nt8.78□□□□□ -1
VPS38Q05919 BUB2YMR055C 921 nt8.78□□□□□ -1
VPS38Q05919 PAU5YFL020C 369 nt8.76□□□□□ -1.01
VPS38Q05919 IGD1YFR017C 588 nt8.76□□□□□ -1.01
VPS38Q05919 ADH7YCR105W 1086 nt8.75□□□□□ -1.01
VPS38Q05919 YFR020WYFR020W 699 nt8.75□□□□□ -1.01
VPS38Q05919 UFD1YGR048W 1086 nt8.75□□□□□ -1.01
VPS38Q05919 ENO1YGR254W 1314 nt8.74□□□□□ -1.01
VPS38Q05919 INO1YJL153C 1602 nt8.73□□□□□ -1.01
VPS38Q05919 MOB1YIL106W 945 nt8.73□□□□□ -1.01
VPS38Q05919 RAD51YER095W 1203 nt8.72□□□□□ -1.01
VPS38Q05919 PAU15YIR041W 375 nt8.71□□□□□ -1.02
VPS38Q05919 NDE2YDL085W 1638 nt8.71□□□□□ -1.02
VPS38Q05919 BUD31YCR063W 474 nt8.7□□□□□ -1.02
VPS38Q05919 YNL140CYNL140C 570 nt8.7□□□□□ -1.02
VPS38Q05919 PGC1YPL206C 966 nt8.7□□□□□ -1.02
VPS38Q05919 TIF3YPR163C 1311 nt8.7□□□□□ -1.02
VPS38Q05919 MRN1YPL184C 1839 nt8.69□□□□□ -1.02
VPS38Q05919 STP3YLR375W 1032 nt8.68□□□□□ -1.02
VPS38Q05919 PFS2YNL317W 1398 nt8.68□□□□□ -1.02
VPS38Q05919 HEM14YER014W 1620 nt8.68□□□□□ -1.02
VPS38Q05919 YIL177CYIL177C 5277 nt8.67□□□□□ -1.02
VPS38Q05919 YRF1-3YGR296W 5580 nt8.67□□□□□ -1.02
VPS38Q05919 YRF1-6YNL339C 5580 nt8.67□□□□□ -1.02
VPS38Q05919 YRF1-7YPL283C 5580 nt8.67□□□□□ -1.02
VPS38Q05919 GLY1YEL046C 1164 nt8.67□□□□□ -1.02
VPS38Q05919 MDH2YOL126C 1134 nt8.67□□□□□ -1.02
VPS38Q05919 YLR460CYLR460C 1131 nt8.66□□□□□ -1.02
VPS38Q05919 TGL5YOR081C 2250 nt8.65□□□□□ -1.02
VPS38Q05919 HSV2YGR223C 1347 nt8.65□□□□□ -1.02
VPS38Q05919 RFC1YOR217W 2586 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)DtA(AGC)D 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)FtA(AGC)F 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)GtA(AGC)G 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)HtA(AGC)H 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)JtA(AGC)J 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)K1tA(AGC)K1 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)K2tA(AGC)K2 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)LtA(AGC)L 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)M1tA(AGC)M1 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)M2tA(AGC)M2 73 nt8.65□□□□□ -1.02
VPS38Q05919 tA(AGC)PtA(AGC)P 73 nt8.65□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 115.5 ms