Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Cacna1aP97445 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cacna1aP97445 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1aP97445 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Cacna1aP97445 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1aP97445 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1aP97445 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1aP97445 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1aP97445 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
Cacna1aP97445 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cacna1aP97445 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Cacna1aP97445 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Cacna1aP97445 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.45■■□□□ 1.18
Cacna1aP97445 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.44■■□□□ 1.18
Cacna1aP97445 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cacna1aP97445 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cacna1aP97445 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cacna1aP97445 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cacna1aP97445 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cacna1aP97445 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cacna1aP97445 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1aP97445 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1aP97445 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1aP97445 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1aP97445 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.41■■□□□ 1.18
Cacna1aP97445 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cacna1aP97445 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cacna1aP97445 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cacna1aP97445 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Cacna1aP97445 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacna1aP97445 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cacna1aP97445 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cacna1aP97445 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.38■■□□□ 1.17
Cacna1aP97445 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Cacna1aP97445 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cacna1aP97445 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cacna1aP97445 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1aP97445 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1aP97445 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacna1aP97445 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacna1aP97445 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacna1aP97445 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cacna1aP97445 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cacna1aP97445 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cacna1aP97445 Particl-201ENSMUST00000205370 1560 ntBASIC22.33■■□□□ 1.17
Cacna1aP97445 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.32■■□□□ 1.16
Cacna1aP97445 Gm12366-201ENSMUST00000121722 873 ntBASIC22.32■■□□□ 1.16
Cacna1aP97445 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.32■■□□□ 1.16
Cacna1aP97445 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.32■■□□□ 1.16
Cacna1aP97445 Gm5786-201ENSMUST00000085368 882 ntBASIC22.32■■□□□ 1.16
Cacna1aP97445 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cacna1aP97445 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.31■■□□□ 1.16
Cacna1aP97445 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cacna1aP97445 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacna1aP97445 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacna1aP97445 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cacna1aP97445 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cacna1aP97445 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacna1aP97445 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cacna1aP97445 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacna1aP97445 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacna1aP97445 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacna1aP97445 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacna1aP97445 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
Cacna1aP97445 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cacna1aP97445 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.27■■□□□ 1.16
Cacna1aP97445 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Cacna1aP97445 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cacna1aP97445 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1aP97445 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.25■■□□□ 1.15
Cacna1aP97445 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacna1aP97445 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cacna1aP97445 Gm30023-201ENSMUST00000197970 889 ntBASIC22.24■■□□□ 1.15
Cacna1aP97445 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1aP97445 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cacna1aP97445 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacna1aP97445 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Cacna1aP97445 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Cacna1aP97445 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cacna1aP97445 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cacna1aP97445 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.2■■□□□ 1.15
Cacna1aP97445 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.2■■□□□ 1.14
Cacna1aP97445 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cacna1aP97445 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cacna1aP97445 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cacna1aP97445 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Cacna1aP97445 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cacna1aP97445 Gm5812-201ENSMUST00000061073 957 ntBASIC22.16■■□□□ 1.14
Cacna1aP97445 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.16■■□□□ 1.14
Cacna1aP97445 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacna1aP97445 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacna1aP97445 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.16■■□□□ 1.14
Cacna1aP97445 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacna1aP97445 Gm45364-201ENSMUST00000210883 159 ntBASIC22.15■■□□□ 1.14
Cacna1aP97445 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.15■■□□□ 1.14
Cacna1aP97445 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cacna1aP97445 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cacna1aP97445 Gm4799-201ENSMUST00000095396 657 ntBASIC22.14■■□□□ 1.14
Cacna1aP97445 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cacna1aP97445 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms